Sanguibacter keddieii: Sked_29460
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Entry
Sked_29460 CDS
T01214
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ske
Sanguibacter keddieii
Pathway
ske03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ske00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Sked_29460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ske03021
]
Sked_29460
03400 DNA repair and recombination proteins [BR:
ske03400
]
Sked_29460
Enzymes [BR:
ske01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Sked_29460
Transcription machinery [BR:
ske03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Sked_29460
DNA repair and recombination proteins [BR:
ske03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Sked_29460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Motif
Other DBs
NCBI-ProteinID:
ACZ22848
UniProt:
D1BBS7
LinkDB
All DBs
Position
complement(3282470..3283474)
Genome browser
AA seq
334 aa
AA seq
DB search
MLIAQRPTLTEEVISESRSRFSIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFTTVPGVKEDVTEIILNVKNLVVSSENDEPVVMYLRKQGSGVVTAADIVPPAGVEVHN
PDLHIATLNDKGKLEIELTVERGRGYVSAQQNKSFDAEIGRVPVDSIYSPVLKVTYKVEA
TRVEQRTDFDKLIVDVETKQAISPRDALASAGKTLVELFGLARELNVEAEGIEIGPSPTD
AALAADLALPIEDLQLTIRSYNCLKREGIHAVGELVARSEADLLDIRNFGAKSINEVKDK
LAELGLSLKDSPLDFDPTTADYYDGDDTEDEQYT
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
gtgctcatcgcacagcgccccacactgaccgaagaggtcatctcggagagccgctcacgc
ttctccatcgagccgctcgagcctggcttcggctacacgctcggcaactcgctccgtcgc
acgctgctctcgtcgatccccggcgcggcagtcacctcgatccggatcgacggtgtgctc
cacgagttcaccaccgtccccggtgtcaaggaagacgtcaccgagatcatcctcaacgtc
aagaacctcgtcgtctcctcggagaacgacgagcccgtcgtgatgtacctgcgcaagcag
ggctccggtgtggtcaccgctgcggacatcgtgccgccggcgggcgtcgaggtgcacaac
cccgacctgcacatcgcgaccctcaacgacaagggaaagctcgagatcgagctcaccgtc
gagcgtgggcgcggctacgtctctgcccagcagaacaagtcgttcgacgccgagatcggc
cgcgtgccggtcgactcgatctactcgccggtcctcaaggtcacgtacaaggtcgaggcc
acccgtgtggagcagcgcaccgacttcgacaagctcatcgtcgacgtcgagaccaagcag
gccatcagcccccgcgacgcgctcgcgtcggctggtaagacgctggtcgagctgttcggc
ctggcccgtgagctcaacgtcgaggccgagggcatcgagatcggcccgtcgccgaccgat
gctgcgctggccgccgacctggcgctcccgatcgaggacctccagctgacgatccgttcg
tacaactgcctcaagcgcgagggcatccacgccgtgggtgagctcgtggcacgcagcgag
gccgacctgctcgacatccggaacttcggtgcgaagtcgatcaacgaggtcaaggacaag
ctcgccgagctcggcctgtccctcaaggactccccgctggacttcgacccgacgaccgcc
gactactacgacggcgacgacacggaagacgagcagtacacctga
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