Sanguibacter keddieii: Sked_31590
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Entry
Sked_31590 CDS
T01214
Name
(GenBank) chaperonin GroL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
ske
Sanguibacter keddieii
Pathway
ske03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ske00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Sked_31590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ske03019
]
Sked_31590
03110 Chaperones and folding catalysts [BR:
ske03110
]
Sked_31590
03029 Mitochondrial biogenesis [BR:
ske03029
]
Sked_31590
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ske04147
]
Sked_31590
Enzymes [BR:
ske01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Sked_31590
Messenger RNA biogenesis [BR:
ske03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Sked_31590
Chaperones and folding catalysts [BR:
ske03110
]
Heat shock proteins
HSP60 / Chaperonin
Sked_31590
Mitochondrial biogenesis [BR:
ske03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Sked_31590
Exosome [BR:
ske04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Sked_31590
Exosomal proteins of other body fluids (saliva and urine)
Sked_31590
Exosomal proteins of breast cancer cells
Sked_31590
Exosomal proteins of colorectal cancer cells
Sked_31590
Exosomal proteins of bladder cancer cells
Sked_31590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
ACZ23056
UniProt:
D1BD52
LinkDB
All DBs
Position
complement(3516549..3518183)
Genome browser
AA seq
544 aa
AA seq
DB search
MAKIIAFNEEARRGMERGLNVLADTVKVTLGPKGRNVVLDKKWGAPTITNDGVSIAKEID
LEDPFERIGAELVKEVAKKTDDVAGDGTTTATVLAQALVREGLRNVAAGSNPIALKRGIE
KAVEAVIEQLLVAAKDIETKEEIAATAAISAGDSAIGELIAEALDKVGKEGVITVEESNT
FGLELELTEGMRFDKGFLARYFETDAERQEAVLEDPYVLIVESKISNVKDLLPLLDQVMK
AGRSLLIIAEDVEGEALATLVLNKIRGTFKSVAVKAPGFGDRRKAILQDIAILTGGQVIS
ETVGLKLETATLDLLGQARKVVVTKDETTIVEGSGDVDQIAGRVKQIRSEIEKSDSDYDR
EKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVALIQA
GKVAFETAALVALEGDEATGANIVRASIDAPLKQIAINAGLEGGVVAEKVRNLPSGQGLN
AATGVYEDLLAAGVNDPVKVTRSALQNAASIAALFLTTEAVVADKPEKAPAMPGGDGGMG
GMDF
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagatcattgccttcaacgaggaggcccgtcgcggcatggagcgtggactcaac
gtcctcgccgacaccgtgaaggtcacgctcggccccaagggtcgcaacgtcgtcctcgac
aagaagtggggcgcgcccaccatcactaacgatggtgtgagcatcgccaaggagatcgac
ctcgaggacccgttcgagcgcatcggtgccgagctcgtcaaggaggtcgccaagaagacc
gacgacgtcgctggcgacggaaccaccaccgccaccgtcctcgcccaggcgctcgtgcgc
gagggcctgcgcaacgtcgcagccggctcgaacccgatcgcgctcaagcgcggcatcgag
aaggccgtcgaggctgtcatcgagcagctcctcgtcgccgcgaaggacatcgagaccaag
gaagagatcgcggccaccgctgccatctcggccggtgacagcgcgatcggcgagctcatc
gccgaggcgctcgacaaggtcggcaaggaaggtgtcatcaccgtcgaggagtcgaacacc
ttcggcctcgagctcgagctcaccgagggcatgcgcttcgacaagggcttcctcgcccgc
tacttcgagaccgatgccgagcgtcaggaagcggtcctcgaggacccgtacgtcctgatc
gtcgagtcgaagatctcgaacgtcaaggacctcctgccgctgctcgaccaggtcatgaag
gccggtcgctcgctgctcatcatcgccgaggacgtcgagggcgaggctcttgcgaccctc
gtgctcaacaagatccgtggcaccttcaagtccgtcgccgtcaaggctccgggcttcggc
gaccgccgcaaggccatcctccaggacatcgcgatcctcaccggtggccaggtcatctcc
gagactgtcggcctcaagctcgagaccgccacgctcgacctgctcggccaggcccgcaag
gtcgtcgtcacgaaggacgagacgaccatcgtcgagggctccggcgacgtcgaccagatc
gccggtcgcgtcaagcagatccgttccgagatcgagaagtcggactccgactacgaccgc
gagaagctccaggagcgcctcgcgaagctcgccggtggtgtcgcggtcatcaaggccggc
gccgccacggaggtcgagctcaaggagcgcaagcaccgcatcgaggacgccgtgcgcaac
gccaaggcagccgtcgaagagggcatcgtcgccggtggtggcgtcgctctcatccaggct
ggcaaggtcgcgttcgagactgccgctctcgtcgccctcgagggtgacgaggcgaccggt
gcgaacatcgtccgcgcctcgatcgacgctccgctcaagcagatcgcgatcaacgccggg
ctcgagggtggagtcgtggccgagaaggtccgcaacctcccctccggccagggcctcaac
gccgcgaccggcgtgtacgaggacctgctcgcggctggtgtcaacgacccggtcaaggtg
acgcgctctgctctgcagaacgctgcctcgatcgcggcgctgttcctcaccaccgaggca
gtcgtggccgacaagcccgagaaggctccggccatgccgggcggcgacggcggcatgggc
ggcatggacttctga
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