Sanguibacter keddieii: Sked_34340
Help
Entry
Sked_34340 CDS
T01214
Name
(GenBank) ABC-type dipeptide transport system, periplasmic component
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
ske
Sanguibacter keddieii
Pathway
ske02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ske00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Sked_34340
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ske02000
]
Sked_34340
Transporters [BR:
ske02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Sked_34340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
ACZ23324
UniProt:
D1BEN8
LinkDB
All DBs
Position
3838300..3839988
Genome browser
AA seq
562 aa
AA seq
DB search
MPSTTSPQQAASPRPAAPARRTTSPHRAAFAAATVSALLLAGCASSGNAAPGTDGAAATG
EPQSGGTLRFGLGYDPTCLDPQQAGGNDSLNVGRQLVDSLTDQDPETGEIVPWIATSWEV
SPDATTFTFTLRDDATFADGTPVDAAAVQANLDGIAELGAQSTLGSSYLDGYVQTVVVDP
QTARVEFSQPSAQFLQATSTMTLGLFSVASTTLSVEDRCAGEFVGSGPFTLTDWQPARSA
SLERREGYAWPSSIAGHEGEAYLDGIEYSVVSEPSVRTGSLQSGQLDAFMNVLPTDEEPL
KASGQTVSARTNPGISFSLVPNTDRPVGGDEEVRLAISAAINRQEVVDTVLTPSYKPATS
PLSSSNPGYTDLGDLLAFDLDAATERLDAEGWEPGDDGIRTKDGQRLQADVVYLTNFAAS
EQILQLVQQQLVKAGIDLQLRQVTMAEYPEVQKVGDYDFSWNSLTRADGDVLRTIYGSSG
RNVARLAEDDPVNTPLDAQAAEGDDAARLALLADAQTQLLERGLSIPVMEFTTVIATAPT
VHDLKFEASSRLSFYDTWIEAP
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
gtgccatcgaccacctcgccccagcaggcagcgtcacctcgtcctgcagcacccgctcgt
cggaccacctcaccccaccgggcagccttcgccgccgccacggtctccgcgctgctgctc
gccggctgcgcctcctccggcaacgccgccccaggtaccgacggtgctgccgcgaccggc
gagccgcagtccggcggcacgctgcgcttcgggctcgggtacgaccccacctgcctcgac
ccgcagcaggcgggcggcaacgactccctcaacgtcggccgccagctcgtcgactccctc
accgaccaggaccccgagaccggcgagatcgtgccgtggatcgcgacgtcgtgggaggtg
tccccggacgccaccaccttcaccttcacgctgcgcgacgacgcgaccttcgccgacggc
acccccgtcgacgcggccgccgtccaggccaacctcgacggcatcgccgagctcggcgcg
cagtcgacgctggggtccagctacctcgacggctacgtgcagaccgtggtcgtcgacccg
cagacggcgcgcgtcgagttctcccagccgagcgcgcagttcctccaggcgacgtcgacc
atgacgctcggcctgttctcggtcgcgagcaccacgctgtccgtcgaagaccgctgcgcc
ggggagttcgtcggctccgggccgttcacgctcaccgactggcagcctgcccgctccgcg
tcgctcgagcgccgcgagggctacgcctggccgtcgagcatcgccgggcacgagggcgag
gcctacctcgacggcatcgagtactccgtggtctccgagccgagcgtgcgcaccggctcg
ctccagtcgggccagctcgacgcgttcatgaacgtgctgcccacggacgaggagccgctg
aaggccagcggtcagaccgtgtccgcccggaccaaccccggcatctcgttctccctggtg
cccaacaccgaccgacccgtcggcggcgacgaggaggtccggctcgcgatcagcgcggcc
atcaaccggcaggaggtcgtcgacaccgtcctcaccccgagctacaagcccgcgaccagc
ccgctgagcagctcgaaccccggctacaccgacctcggcgacctgctcgccttcgacctc
gacgccgccacggagcgcctcgacgccgagggctgggagcccggcgacgacgggatccgc
accaaggacggccagcgtctccaggccgacgtcgtctacctcaccaacttcgccgcgagc
gagcagatcctccagctcgtccagcagcagctggtcaaggccggcatcgacctccagctg
cgccaggtgaccatggccgagtaccccgaggtgcagaaggtcggcgactacgacttcagc
tggaactccctcacccgcgccgacggcgacgtgctccgcaccatctacggctcgagcggc
cgcaacgtggcccgcctcgccgaggacgaccccgtcaacaccccgctcgacgcccaggcc
gccgagggagacgacgccgcacgcctcgccctcctcgccgacgcccagacgcagctgctc
gagcgcgggctgtccatcccggtcatggagttcaccaccgtcatcgcgacggccccgacg
gtccacgacctgaagttcgaggcgtcgtcgcggctgtccttctacgacacctggatcgag
gcaccgtga
DBGET
integrated database retrieval system
