Streptomyces koelreuteriae: KJK29_03150
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Entry
KJK29_03150 CDS
T09603
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
skg
Streptomyces koelreuteriae
Pathway
skg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
skg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KJK29_03150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
skg03400
]
KJK29_03150
DNA repair and recombination proteins [BR:
skg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KJK29_03150
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
KJK29_03150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
ABC_tran
AAA_21
AAA_29
DnaJ_CXXCXGXG
AAA_16
nSTAND1
RsgA_GTPase
DUF4350
Viral_helicase1
HUTI_composite_bact
Motif
Other DBs
NCBI-ProteinID:
QWB21656
LinkDB
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Position
687910..690273
Genome browser
AA seq
787 aa
AA seq
DB search
MHDPHTPHDPYVRVRGAREHNLQGIDVDIPRDVLAVFTGVSGSGKSSLAFGTIYAEAQRR
YFESVAPYARRLIHQVGAPKVGEITGLPPAVSLQQRRAAPTSRSSVGTVTNLSNSLRMLF
SRAGTYPPGAERLDSDAFSPNTAAGACPECHGLGQVHRTSEELLVPDPSLSIREGAVAAW
PGAWQGKNLRDILDALGHDVDRPWRELPATAREWILFTDEQPVVTVHPVRDADRIQRPYQ
GTYMSARRYVMKTFSDSKSPTLRTKAERFLASAPCPACGGSRLRPEALAVTFGGRTIAEL
AARPLVELASGLDGTSETARVLTADLTSRIAPVLELGLGYLSLDRPTPTLSAGELQRLRL
ATQLRSGLFGVVYVLDEPSAGLHPADTEALLTVLERLKSAGNSVFVVEHHLDVVRGADWL
VDVGPQAGEHGGRVLHSGPVADLAAVEESATARYLFDRSPAPAREVREPGGWLTTGPVTR
HNLRGVTADFPLGVFTAVTGVSGSGKSTLIGEITEDAAGTAGVGRLVSVDQKPIGRTPRS
NLATYTGLFDVVRRVFAATDGARQRGFGVGRFSFNVVGGRCETCQGEGFVSVELLFLPST
YAPCPDCGGARYNTETREVTYRGRDIAQVLDLTVESAAEFFADTPAVARSLGTLLDVGLG
YLRLGQPATELSGGEAQRIKLASELQRGRRGHTLYLLDEPTTGLHPADVDVLMRQLHGLV
DAGHTVIVVEHDMSVVARADWVIDLGPGGGDAGGRIVAAGPPAEVAAAEPSATARYLGRA
LGRERQG
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgcacgacccccacaccccccacgacccctacgtccgcgtccgcggcgcccgcgagcac
aaccttcagggcatcgacgtcgacatcccccgggacgtgctggccgtgttcaccggcgtg
tccggctcgggcaagtcgtccctggcgttcggcacgatctacgcggaggcccagcggcgc
tacttcgaatcggtcgcaccgtacgcacgccggctgatccaccaggtcggcgcgccgaag
gtcggggagatcaccggtctgccgccggccgtctcgctccagcagcgccgcgccgccccc
acctcacgctcctccgtcggcaccgtcaccaacctctccaactcgctgcgcatgctgttc
tcccgggccggcacctatccgcccggcgccgagcgcctcgactccgacgcgttctcgccc
aacacggcggccggggcctgcccggagtgccacgggctcgggcaagtgcaccgtacgagc
gaggagttgctggtccccgacccgtcgctgtcgatccgcgagggggccgtcgccgcgtgg
ccgggcgcctggcagggcaagaacctgcgggacatcctcgacgcgctcggccacgacgtg
gaccggccgtggcgggaactgcccgcgacggcccgggagtggattctcttcacggacgag
cagccggtcgtcaccgtgcacccggtgcgggacgcggaccgcatccagcggccgtaccag
ggcacctacatgagcgcccggcggtacgtgatgaagaccttctcggactccaagagcccg
accctgcggacgaaggccgaacggttcctggccagtgcgccctgcccggcctgcggcgga
agccggctgcgccccgaggcactcgccgtgacgttcggcggccggaccatcgccgagctg
gccgcccggccgctggtggagctggcctccggtctcgacgggacatcggagaccgcccgg
gtcctcaccgccgacctgacgtcccggatcgcaccggtcctcgagctgggcctcggctac
ctcagcctcgaccggcccacccccaccctctccgccggcgaactgcaacgcctgcgcctc
gccacccagctgcgctcgggcctgttcggcgtcgtctacgtcctcgacgagccgtcggcc
gggctgcacccggcggacaccgaggcactgctcacggtgctggagcggctgaagtcggcc
gggaactcggtgttcgtggtggagcaccacctcgatgtcgtgcgcggcgcagactggctg
gtggacgtgggtccgcaggcgggcgagcacggcgggcgggtgctgcacagcggcccggtg
gcggacctggccgcggtcgaggagtcggcgacggcccgctacctgttcgaccgctccccc
gctccggcccgggaggtccgtgaaccgggcgggtggctgacgaccggcccggtcacccgg
cacaacctgcgcggggtgaccgcagacttcccgctcggcgtgttcaccgcggtcaccggg
gtgtcgggctccggcaagtccacgctcatcggcgagatcaccgaggacgcggcgggcacg
gcgggggtgggccggctggtctcggtcgaccagaagcccatcgggcgcaccccgcgctcg
aacctcgcgacgtacaccggtctcttcgacgtggtgcgcagggtgttcgcggccaccgac
ggggcgcgtcaacggggcttcggggtcggccggttctccttcaacgtggtgggcgggcgc
tgtgagacctgccagggcgaggggttcgtcagtgtggagctgctgttcctgccgagcacg
tacgcgccctgcccggactgcggcggggcccggtacaacaccgagacgcgggaagtgacg
taccgggggcgggacatcgcgcaggtgctggatctgacggtggagagcgcggcggagttc
ttcgcggacaccccggccgtggcccgcagcctcggcaccctgctggacgtgggcctcggc
tatctgcgcctcggccagcccgcgacggagctgtccggcggcgaggcgcagcgcatcaag
ctggcgagcgagctgcagcgcggccgtcgcggccacacgctctacctcctcgacgagccg
accaccggtctccacccggccgacgtggatgtgctgatgcgccagttgcacggcctggtc
gacgccgggcacacggtgatcgtcgtcgagcacgacatgtccgtcgtcgcccgcgcggac
tgggtgatcgacctcggcccgggcggcggcgacgcgggcggccggatcgtggcggccggt
ccgcccgcggaggtggcggcggcagagccgagcgccacagcccgctatctgggccgggcg
ctcggccgggagcgacaggggtag
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