Streptomyces koelreuteriae: KJK29_03270
Help
Entry
KJK29_03270 CDS
T09603
Name
(GenBank) Fpg/Nei family DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
skg
Streptomyces koelreuteriae
Pathway
skg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
skg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KJK29_03270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
skg03400
]
KJK29_03270
Enzymes [BR:
skg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
KJK29_03270
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
KJK29_03270
DNA repair and recombination proteins [BR:
skg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KJK29_03270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Zn_ribbon_TFIIB
NFACT_N
Ribosomal_S13
Zn_ribbon_RRN7
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
QWB21677
LinkDB
All DBs
Position
complement(715736..716599)
Genome browser
AA seq
287 aa
AA seq
DB search
MPELPEVEALKDFLAEHLVGHEIVRVLPVAISVLKTYDPPLSALEGHEVVAVRRYGKFLD
LATEGGPHFVTHLARAGWLHWKDRLPDGPPRPGKGPLALRVALETGSGFDLTEAGTQKRL
AVYVVGDPQEVPGVARLGPDPLADDFDEERFAELLAGERRQLKGALRDQSLIAGVGNAYS
DEILHAARMSPFKLAASLSAEETRRLYEALRDTLTEAVERSRGVAAGRLKAEKKSGLRVH
GRTGEPCPVCGDTVREVSFSDSSLQYCPTCQTGGKPLADRRMSRLLK
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgccggaactccccgaggtcgaggcgctcaaggacttcctggccgagcacctcgtcggc
catgagatcgtccgggtgctgcccgtggcgatcagcgtcctgaagacgtacgacccgccc
ctgtccgcgctggaggggcacgaggtcgtcgccgtgcgccggtacggcaagttcctcgac
ctcgcgaccgagggcggcccgcacttcgtgacgcacctggcccgcgcgggctggctgcac
tggaaggatcgcctgcccgacggcccgccccgccccggcaaggggcccctcgcgctgcgc
gtggccctggagaccggctccggcttcgacctgaccgaggccggcacccagaagcggctc
gccgtgtacgtcgtgggggacccgcaggaggtcccgggcgtcgcccgactcggcccggac
cccctcgccgacgacttcgacgaggaacgcttcgcggaactcctggccggtgaacggcgg
cagctcaagggcgccttgcgcgaccagagcctcatcgcgggcgtgggcaacgcctacagc
gacgagatcctgcatgcggcgcggatgtcgccgttcaagctggccgcgtccctgagcgcg
gaggagacccgccggctgtacgaggccctgcgcgacacgctcaccgaggccgtagaacgc
tcccggggcgtggcggccgggcggctgaaggccgagaagaagagcggcctgcgcgtccac
ggccgcaccggcgagccctgcccggtgtgcggcgacaccgtccgggaggtgtccttcagc
gactcctcgctgcagtactgcccgacctgccagacgggcggcaaaccgctggcggaccgc
aggatgtcccggctgctgaagtga
DBGET
integrated database retrieval system