Streptomyces koelreuteriae: KJK29_05210
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Entry
KJK29_05210 CDS
T09603
Name
(GenBank) rhamnogalacturonan lyase
KO
K18197
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
skg
Streptomyces koelreuteriae
Brite
KEGG Orthology (KO) [BR:
skg00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
KJK29_05210
Enzymes [BR:
skg01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
KJK29_05210
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GFIT
Motif
Pfam:
RGL11_C
RGI_lyase
FG-GAP_3
FG-GAP
Motif
Other DBs
NCBI-ProteinID:
QWB28126
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Position
complement(1182688..1184451)
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AA seq
587 aa
AA seq
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MAATARQVEKLDRGVVSVHTGSGNLVSWRWLGTDPDNVSFNVYRAGTKVNSTPVTGSTNY
FHSGAPAQADYTVRAVVNGTEQGDSVHAVQFRTGYKDIPISPPSGGTTPDGVAYTYDAND
ASLGDLDGDGALDLVLKWQPTNAKDNSQSGYTGNTVVDGIKLDGTRLWRIDLGRNIRSGA
HYTQFQVYDYDGDGRAEVAMKTADGTRDGTGTVIGSSSADHRNSSGYVLAGPEFLTMFNG
QTGKAMQSVDYVPARGTVSSWGDSYGNRVDRFLAGTAYLDGSRPSLIMARGYYTRTVIAA
WDWRNGSFTRRWTFDTNSSTNSGKGYDGQGNHSLSVADVDADGKDEIVYGAMTVDDNGGG
LWTTKLGHGDAGHVGDLDPSRAGLEYFKVSESTSQPGSWMADARTGAILWKTASGADNGR
GVSGDIYAGSAGAESWSASDTTLRSATGASLGREPSSVNFLSWWDGDPVRELLDGTRIDK
YGTSGDTRLLTGSGVSSNNGTKSTPVLSGDLLGDWREEVIWRTSDNTALRVYSTPHETNT
RITTLLHDTQYRTALAWQNTAYNQPPHPSYFLGNAMPTAPRPTVYTP
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggccgccaccgcccgccaggtcgagaagctcgaccggggcgtggtcagcgtccacacc
ggcagcggcaacctggtgagctggcgctggctcggcacggaccctgacaacgtctccttc
aacgtctaccgggccggtacgaaggtcaactccacgccggtcaccggctccacgaactac
ttccactccggcgcccccgcccaggccgactacaccgtccgcgcggtggtgaacggcacg
gagcagggcgactcggtgcacgcggtccagttccgaaccggctacaaggacatcccgatc
tccccgccctccggtggcacgacccccgacggggtggcgtacacctacgacgccaacgac
gcctccctcggcgacctcgacggcgacggcgccctggacctcgtcctgaagtggcagccc
accaatgccaaggacaactcccagtccggctacacgggcaacaccgtcgtcgacggcatc
aagctcgacggcacccggctgtggcgcatcgacctgggccgcaacatccgctccggcgcg
cactacacgcagttccaggtgtacgactacgacggcgacggcagggccgaggtcgccatg
aagaccgccgacggcacccgggacggcacgggcacggtcatcggcagttcctcggccgac
caccgcaactccagcggctatgtgctggccgggcccgagttcctgaccatgttcaacggg
cagacgggcaaggcgatgcagagcgtcgactacgtcccggcccgtggcaccgtctcctcc
tggggcgactcctacggcaaccgcgtcgaccgcttcctcgcgggcacggcgtacctggac
ggctcacgcccctccctgatcatggcgcgcggctactacacccgcacggtgatcgccgcc
tgggactggcggaacggctccttcacccgccgctggaccttcgacaccaactcctccacc
aacagcggcaagggctacgacggccagggcaaccacagcctgtccgtcgcggacgtcgac
gcggacggcaaggacgagatcgtctacggcgcgatgaccgtcgacgacaacggaggcggg
ctctggaccaccaagctgggccacggcgacgccggccacgtcggtgacctcgatccctcc
cgcgcgggcctggagtacttcaaggtctccgagagcacgagccagcccggctcctggatg
gccgacgcccgcacgggcgcgatcctctggaagaccgcctccggcgccgacaacggccgg
ggagtctccggcgacatctacgcgggcagcgcgggagccgagtcctggtccgcctccgac
accaccctgcgctcggcgaccggtgcctccctcgggcgggaaccctccagcgtcaacttc
ctgtcctggtgggacggcgacccggtccgtgaactcctcgacggcacccgcatcgacaag
tacggcacgtccggcgacacccgcctcctgaccggctccggcgtctcctccaacaacggc
accaagtccacccccgttctgtccggcgacctcctcggcgactggcgtgaggaggtcatc
tggcgcaccagcgacaacacggccctgcgcgtctactcgaccccgcacgagacgaacacg
aggatcacgaccctgctccacgacacccagtaccgcacggccctggcctggcagaacacc
gcgtacaaccagcccccgcacccgagttacttcctgggcaacgccatgccgacggctccg
aggccgacggtctacaccccgtga
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