Streptomyces koelreuteriae: KJK29_05620
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Entry
KJK29_05620 CDS
T09603
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
skg
Streptomyces koelreuteriae
Pathway
skg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
skg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KJK29_05620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
skg03000
]
KJK29_05620
03400 DNA repair and recombination proteins [BR:
skg03400
]
KJK29_05620
Enzymes [BR:
skg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
KJK29_05620
Transcription factors [BR:
skg03000
]
Prokaryotic type
Helix-turn-helix
AraC family
KJK29_05620
DNA repair and recombination proteins [BR:
skg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KJK29_05620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HhH-GPD
HTH_AraC
HHH
DUF6233
Motif
Other DBs
NCBI-ProteinID:
QWB22092
UniProt:
A0ABX8FM08
LinkDB
All DBs
Position
complement(1265018..1266487)
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AA seq
489 aa
AA seq
DB search
MHTDTERCLRAVRSKDARFDGWFFTAVLTTGIYCRPSCPVVPPKPENMVFHPSAAACQQA
GFRACKRCRPDTSPGSPEWNQRADLVARAMRLIADGVVDREGVPGLAGRLGYSTRQVERQ
LLAELGAGPLALARAQRAQTARLLIETTSLPMAQLAFAAGFASIRTFNDTVREVFALSPS
ELRTRAPKRQGASTPGALALRLPFRTPLNPDNLFGHLAATAVPGVEEWRDGSYRRTLRLP
YGHGIVALTPTPDHIACRLTLSDLRDLTVAISRCRRLLDLDADPVAIDDQLRTDPVLAPL
VDKAPGRRVPRTVDEAEFAVRAVLGQQVSTAAARTHAARLVTAHGEPVDDPEGGLTHLFP
APEALAALDPESLAMPRSRRTTFTTLVRQLADGELHLGVESDWPRSRAQLLALPGLGPWT
ADVIAMRALGDPDAFLPTDLGIRRAARELGLPSTPAALTARAAAWRPWRAYAVQYLWATD
SHPINFLPV
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgcacaccgacaccgagcgctgcctgcgcgccgtccggtccaaggacgcgcgcttcgac
ggctggttcttcacggccgtcctgacgaccggcatctactgccgtccgagctgcccggtc
gtgccgcccaagccggagaacatggtcttccatccgagcgcggcggcctgtcagcaggcc
gggttccgggcctgcaagcgctgccggcccgacaccagccccggctccccggagtggaac
cagcgcgccgacctggtggcccgcgccatgcggctgatcgccgacggcgtcgtggaccgc
gagggcgtgccgggcctcgccggccggctcggctacagcacccggcaggtcgagcgccag
ctgctcgccgaactgggcgcgggacctctcgcgctcgcccgggcccagcgtgcccagacg
gcccggctgctcatcgagacgacgagcctgccgatggcacagctcgccttcgccgccggc
ttcgcctcgatccgcaccttcaacgacaccgtccgcgaggtcttcgccctgtccccgtcc
gagctgcgcacccgcgccccgaagcggcagggcgcgagcacgcccggcgcgctcgccctg
cggttgccgttccggaccccgctcaaccccgacaacctcttcggccacctcgccgcgacg
gccgtacccggggtggaggagtggcgcgacggctcctaccgccgcaccctgcgcctcccg
tacggccacggcatcgtcgccctcacccccacccccgaccacatcgcctgccgcctcacc
ctcagtgacctgcgcgatctgaccgtcgccatcagccgctgccgccgcctgctcgacctg
gacgccgacccggtcgcgatcgacgaccagctgcgcaccgacccggtcctcgcgccgctg
gtcgacaaggcacccggccggcgtgtcccgcgcacggtggacgaggccgagttcgccgtc
cgggccgtgctcggccagcaggtctccaccgccgccgcccgcacccacgcggcccgcctg
gtcaccgcgcacggcgaaccggtcgacgaccccgagggcggcctcacccacctcttcccg
gcccccgaggccctcgcggccctggaccccgagtcactggcgatgccgcgcagccgccgc
accaccttcaccaccctggtccgccagctcgccgacggcgaactccacctgggagtggag
agcgactggccgcgcagccgcgcccagctcctcgccctgcccggcttgggcccctggacg
gccgacgtcatcgccatgcgcgccctcggcgacccggacgccttcctccccaccgacctc
ggcatccgccgcgccgcccgcgaactcggcctgccctccacgcccgccgcgctcaccgca
cgggctgcggcctggcgcccgtggcgggcctacgccgtccagtacctctgggcgacggac
agccacccgatcaacttccttccggtataa
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