Streptomyces koelreuteriae: KJK29_08595
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Entry
KJK29_08595 CDS
T09603
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
skg
Streptomyces koelreuteriae
Pathway
skg02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
skg00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
KJK29_08595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
skg03021
]
KJK29_08595
Transcription machinery [BR:
skg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KJK29_08595
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HC2
Sigma70_r1_1
DUF7093
CDC27
Motif
Other DBs
NCBI-ProteinID:
QWB22636
UniProt:
A0ABX8FNH8
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All DBs
Position
complement(1959170..1960711)
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AA seq
513 aa
AA seq
DB search
MSASTSRTLPPEIAESVSVMALIERGKAEGQIAGDDVRRAFEADQIPATQWKNVLRSLNQ
ILEEEGVTLMVSAAEPKRTRKSVAAKSPAKRTATKTVAAKAVTTRKATATATPAAPAAEP
AAEEEAPAKKAAAKKTTAKKAAAKKTVAKKTAAKKTSAKKDDAELLEEEVLEEAAPGKPG
EEPESTPENAGFVLSDEDEDDAPAQQVAAAGATADPVKDYLKQIGKVPLLNAEQEVELAK
RIEAGLFAEDKLANADKLAPKLKRELEIIAEDGRRAKNHLLEANLRLVVSLAKRYTGRGM
LFLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAITRAMADQARTIRIPVHMVEV
INKLARVQRQMLQDLGREPTPEELAKELDMTPEKVIEVQKYGREPISLHTPLGEDGDSEF
GDLIEDSEAVVPADAVSFTLLQEQLHSVLDTLSEREAGVVSMRFGLTDGQPKTLDEIGKV
YGVTRERIRQIESKTMSKLRHPSRSQVLRDYLD
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
gtgtcggccagcacatcccgtacgctcccgccggagatcgccgagtccgtctctgtcatg
gcgctcattgagcggggaaaggctgaggggcagatcgccggcgatgacgtgcgtcgggcc
ttcgaagctgaccagattccggccactcagtggaagaacgtactgcgcagcctcaaccag
atcctcgaggaagagggtgtgacgctgatggtcagtgccgcagagcccaagcgcacccga
aagagcgtcgcagcgaagagtcccgccaagcgcaccgccaccaagacggtcgcggccaag
gcggtgaccaccaggaaggccaccgccaccgccacgccggcggcgcccgcagccgagccc
gccgctgaggaagaggcgcctgccaagaaggcagccgccaagaagacgaccgccaagaag
gcggccgcgaagaagaccgtcgccaagaagacggcggccaagaagaccagcgccaagaag
gacgacgccgagctcctcgaagaggaggtgctcgaggaagcagcccccggcaagcccggc
gaggagcccgagagcacgccggagaacgcgggcttcgtcctgtccgacgaggacgaggac
gacgcgcccgcccagcaggtcgccgccgccggcgccaccgccgacccggtcaaggactac
ctcaagcagatcggcaaggtcccgctgctcaacgccgagcaggaggtcgagctcgccaag
cgcatcgaggccggtctgttcgccgaggacaagctggccaacgccgacaagctcgccccc
aagctcaagcgtgagctggagatcatcgccgaggacggccgccgcgccaagaaccacctc
ctggaggccaacctccgtctggtggtctccctggccaagcgctacaccggccgcggcatg
ctcttcctggacctcatccaggagggcaacctcggtctgatccgcgcggtcgagaagttc
gactacaccaagggctacaagttctccacgtacgccacctggtggatccgtcaggcgatc
acccgcgccatggccgaccaggcccgcaccatccgtatcccggtgcacatggtcgaggtc
atcaacaagctcgcgcgcgtgcagcgccagatgctccaggacctgggccgcgagcccacc
ccggaggagctggccaaggaactcgacatgacccccgagaaggtcatcgaggtccagaag
tacggccgcgagcccatctcgctgcacaccccgctgggcgaggacggcgacagcgagttc
ggtgacctcatcgaggactccgaggcggtcgtcccggccgacgcggtcagcttcaccctc
ctccaggagcagctgcactccgtcctggacaccctgtccgagcgcgaggcgggcgtcgtc
tccatgcgcttcggtctcaccgacggtcagccgaagaccctcgacgagatcggcaaggtc
tacggcgtcacgcgcgagcggatccgccagatcgagtccaagaccatgtcgaagctgcgc
cacccgtcccgttcgcaggtgctgcgcgactacctcgactag
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