KEGG   Streptomyces koelreuteriae: KJK29_09000
Entry
KJK29_09000       CDS       T09603                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
skg  Streptomyces koelreuteriae
Pathway
skg03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:skg00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    KJK29_09000
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:skg03019]
    KJK29_09000
Messenger RNA biogenesis [BR:skg03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     KJK29_09000
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C RMMBL Lactamase_B Lactamase_B_2 Anti-Pycsar_Apyc1
Other DBs
NCBI-ProteinID: QWB22707
UniProt: A0ABX8FNU0
LinkDB
Position
complement(2063045..2064730)
AA seq 561 aa
MSHPHPELGPPPPLPDGGLRVTPLGGLGEIGRNMTVFEYGGRLLIVDCGVLFPEEEQPGI
DLILPDFSSIRDRLDDIEGIVLTHGHEDHIGAVPFLLREKPDIPLIGSKLTLALIEAKLQ
EHRIRPYTLEVAEGHRERIGPFDCEFVAVNHSIPDALAVAIRTPAGMVVHTGDFKMDQLP
LDNRLTDLHAFARLSEEGIDLLLSDSTNAEVPGFVPPERDISNVLHQVFGNARKRIIVAS
FASHIHRIQQILDAANEYGRRVAFVGRSMVRNMGIARDLGYLKVPPGLVVDVKTLDDLPD
REVVLVCTGSQGEPMAALSRMANRDHQIRIVQGDTVILASSLIPGNENAVYRVINGLTRW
GANVVHKGNAKVHVSGHASAGELLYFYNICRPKNLMPVHGEWRHLRANAELGALTGVPHD
RIVIAEDGVVVDLIEGKAKISGKVQAGYVYVDGLSVGDVGEPALKDRKILGDEGIISVFV
VIDSSTGKITGGPHIQARGSGIEDSAFGDVAPRITEVLERSAQDGVVEPHQLQQLVRRTL
GKWVSDNYRRRPMILPVVVDV
NT seq 1686 nt   +upstreamnt  +downstreamnt
ttgagtcatccgcatcccgaactcggcccgcccccgccgctccccgacggcggcctgcgc
gtcaccccgctcggcggtctcggtgagatcggccgcaacatgacggtcttcgaatacggc
ggccgcctgctgatcgtcgactgcggagtgctcttccccgaggaggagcagcccggaatc
gacctgatcctgccggacttctcgtccatcagggaccgcctcgacgacatcgagggcatc
gtcctcacgcacggccacgaggaccacatcggcgccgttcccttcctcctgcgcgagaag
ccggacatcccgctgatcggctccaagctgaccctcgccctcatcgaggccaagctccag
gagcaccgcatccgtccgtacaccctcgaggtggcggaagggcaccgcgagcgcatcggc
cccttcgactgcgagttcgtcgcggtcaaccactccatcccggacgcgctggccgtggcc
atccgcaccccggcgggcatggtcgtccacacgggcgacttcaagatggaccagctcccg
ctggacaaccgtctgacggacctgcacgcgttcgcacgtctgagcgaggaagggatcgac
ctcctcctctccgactcgacgaacgccgaggtcccggggttcgtcccgcccgagcgggac
atctccaacgtcctgcaccaggtcttcgggaacgcccgcaagcggatcatcgtggcgagc
tttgccagccacatccaccgcatccagcagatcctggacgcggccaacgaatacggccgc
agggtcgccttcgtcggccgctcgatggtccgcaacatgggcatcgcgcgggacctgggc
tatctgaaggtcccgccgggcctggtggtcgacgtcaagacgctcgacgaccttcccgac
cgcgaggtggtcctggtctgcacgggctcccagggcgaaccgatggcggccctgtcccgc
atggccaacagggaccaccagatccggatcgtccagggcgacacggtgatcctggcgtcg
tccctgatccccggcaacgagaacgcggtctaccgcgtgatcaacggcctcacccgctgg
ggcgccaacgtggtccacaagggcaacgccaaggtccacgtctccggccacgcgtccgcg
ggcgagctgctgtacttctacaacatctgccgcccgaagaacctgatgccggtgcacggc
gaatggcgccacctgcgcgccaacgccgaactgggcgccctgaccggcgtcccgcacgac
cgcatcgtcatcgccgaggacggcgtggtcgtcgacctcatcgagggcaaggcgaagatc
tccggcaaggtccaggcgggctatgtctacgtcgacggcctctccgtcggggacgtgggc
gagccggccctcaaggaccgcaagatcctcggcgacgagggcatcatctcggtcttcgtg
gtcatcgactcctccaccgggaagatcaccggcggcccgcacatccaggcccgcggttcc
ggcatcgaggactcggccttcggcgacgtggccccccggatcacggaggtgctcgaacgc
tccgcccaggacggcgtggtcgaaccccaccagctccagcagctcgttcgccgcacgctg
ggcaagtgggtctcggacaactaccggcgccggccgatgatcctgcctgtggtcgtggac
gtctga

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