Streptomyces koelreuteriae: KJK29_09040
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Entry
KJK29_09040 CDS
T09603
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
skg
Streptomyces koelreuteriae
Pathway
skg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
skg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KJK29_09040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
skg03019
]
KJK29_09040
03016 Transfer RNA biogenesis [BR:
skg03016
]
KJK29_09040
Enzymes [BR:
skg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
KJK29_09040
Messenger RNA biogenesis [BR:
skg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
KJK29_09040
Transfer RNA biogenesis [BR:
skg03016
]
Prokaryotic type
tRNA degradation factors
KJK29_09040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
KH-I_KHDC4-BBP
KH_PNO1_2nd
KH_2
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
QWB22714
UniProt:
A0ABX8FNK2
LinkDB
All DBs
Position
complement(2070517..2072733)
Genome browser
AA seq
738 aa
AA seq
DB search
MENETHYAEAVIDNGAFGTRTIRFETGRLAKQAAGSAVAYLDDDTMVLSATTASKNPKDQ
LDFFPLTVDVEERMYAAGKIPGSFFRREGRPSEDAILTCRLIDRPLRPSFKKGLRNEIQV
VATIMALNPDHLYDVVAINAASASTQLAGLPFSGPIGGVRVALIRGQWVAFPTHTELEDA
AFDMVVAGRVLEDGDVAIMMVEAEATDKTIKLVEGGVEAPTEEVVAAGLDAAKPFIKVLC
KAQSDLAAKAAKPTGEFPIFLDYQDDVLEALTAAVRPELASALTIAGKQERESELDRVKA
LAAEKLLPEFEGREKEISAAYRSLTKTLVRERVIKEKKRIDGRGVTDIRTLAAEVEAIPR
VHGSAVFERGETQILGVTTLNMLRMEQQLDTLSPVTRKRYMHNYNFPPYSTGETGRVGSP
KRREIGHGALAERALVPVLPTREEFPYAIRQVSEALSSNGSTSMGSVCASTMSLLNAGVP
LKAPVAGIAMGLISQEIEGETHYVTLTDILGAEDAFGDMDFKVAGTKDFVTALQLDTKLD
GIPASVLAAALKQARDARLHILDVMMEAIDTPDEMSPNAPRIITVKIPVDKIGEVIGPKG
KMINQIQEDTGAEITIEDDGTIYIGAADGPSAEAARTTINGIANPTMPEVGERYLGTVVK
TTTFGAFVSLLPGKDGLLHISQIRKLAGGKRVENVEDVLGVGQKVQVEIAEIDSRGKLSL
IPVIEGEENDETKDDTDK
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
gtggagaacgagacccactacgccgaggccgtcatcgacaatggcgccttcggcacccgc
accatccgcttcgagacgggccgcctggccaagcaggccgccggctccgccgtggcgtac
ctggacgacgacaccatggtgctgtcggccaccaccgcctccaagaaccccaaggaccag
ctcgacttcttccccctgacggtggacgtcgaggagcggatgtacgccgccggcaagatc
cccggcagcttcttccgccgtgagggccgtccctccgaggacgccatcctcacctgccgc
ctgatcgaccgcccgctgcgcccgtccttcaagaagggcctgcgcaacgagatccaggtc
gtcgccacgatcatggcgctcaaccccgaccacctgtacgacgtcgtggcgatcaacgcc
gcctccgcgtccacgcagctggccggcctgcccttctccggcccgatcggcggcgtccgc
gtcgcgctgatccgcggccagtgggtggccttcccgacgcacaccgagctcgaggacgcc
gccttcgacatggtcgtcgccggccgtgtcctggaggacggcgacgtcgcgatcatgatg
gtcgaggccgaggccaccgacaagaccatcaagctggtcgagggcggcgtcgaggcgccg
accgaggaggtcgtcgccgccggtctggacgccgcgaagcccttcatcaaggtcctctgc
aaggcccagtcggacctcgccgccaaggccgccaagccgaccggcgagttcccgatcttc
ctggactaccaggacgacgtcctcgaggcgctcaccgccgccgtccgcccggagctcgcc
tccgcgctgaccatcgccggcaagcaggagcgcgagtccgagctggaccgcgtcaaggcg
ctcgccgccgagaagctcctgccggagttcgagggccgcgagaaggagatctccgccgcg
taccgctcgctgaccaagaccctggtccgtgagcgcgtcatcaaggagaagaagcgcatc
gacggccgcggtgtcaccgacatccgcaccctggccgccgaggtcgaggccatcccgcgc
gtccacggctccgccgtgttcgagcgtggcgagacccagatcctgggtgtcacgacgctg
aacatgctccgcatggagcagcagctcgacacgctgtcgccggtgacgcgcaagcgctac
atgcacaactacaacttcccgccgtactccaccggcgagaccggccgcgtcggctccccg
aagcgccgcgagatcggccacggcgccctcgccgagcgcgccctggtgccggtcctgccg
acgcgcgaggagttcccctacgcgatccgccaggtctccgaggcgctgagctccaacggc
tcgacgtccatgggctcggtctgcgcctccaccatgtcgctgctgaacgccggtgtgccc
ctgaaggccccggtcgccggtatcgccatgggcctgatctcccaggagatcgagggcgag
acgcactacgtcaccctcaccgacatcctcggtgcggaggacgccttcggcgacatggac
ttcaaggtcgccggcacgaaggacttcgtgaccgccctccagctcgacaccaagctggac
ggcatcccggcctccgtcctggccgccgctctcaagcaggcccgtgacgcccgcctccac
atcctcgacgtgatgatggaagcgatcgacacgccggacgagatgtccccgaacgccccg
cggatcatcaccgtcaagatccccgtggacaagatcggtgaggtcatcggccccaagggc
aagatgatcaaccagatccaggaggacaccggcgccgagatcaccatcgaggacgacggc
accatctacatcggtgccgccgacggcccctccgcggaggccgctcgtacgacgatcaac
ggcatcgccaacccgaccatgccggaggtcggcgagcgctacctgggcacggtcgtgaag
acgaccaccttcggcgcgttcgtgtcgctgctcccgggcaaggacggtctgctgcacatc
tcgcagatccgcaagctcgccggcggcaagcgcgtggagaacgtcgaggacgtcctcggt
gtgggccagaaggtccaggtcgagatcgccgagatcgactcccgcggcaagctctccctg
atcccggtcatcgagggcgaagagaacgatgagacgaaggacgacaccgacaagtga
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