Streptomyces koelreuteriae: KJK29_09530
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Entry
KJK29_09530 CDS
T09603
Symbol
whiG
Name
(GenBank) RNA polymerase sigma factor WhiG
KO
K02405
RNA polymerase sigma factor FliA
Organism
skg
Streptomyces koelreuteriae
Pathway
skg02020
Two-component system
skg02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
skg00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
KJK29_09530 (whiG)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
KJK29_09530 (whiG)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
skg03021
]
KJK29_09530 (whiG)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
skg02035
]
KJK29_09530 (whiG)
Transcription machinery [BR:
skg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KJK29_09530 (whiG)
Bacterial motility proteins [BR:
skg02035
]
Flagellar system
Flagellar assembly proteins
Stator
KJK29_09530 (whiG)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
Sigma70_ECF
HTH_31
HTH_23
UPF0122
Motif
Other DBs
NCBI-ProteinID:
QWB22806
UniProt:
A0ABX8FNQ9
LinkDB
All DBs
Position
complement(2197174..2198016)
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AA seq
280 aa
AA seq
DB search
MPQHTSGSDRAAIPPAARDGGSVRPPAPSTLDELWRSYKATGDERLREQLILHYSPLVKY
VAGRVSVGLPSNVEQADFVSSGVFGLIDAIEKFDIDREIKFETYAITRIRGAMIDELRAL
DWIPRSVRQKARNVERAYATLEARLRRTPTEGEVAGELGIAVEELHAVFSQLSLANVVAL
EELLHGGGEGGDGLSVMDTLEDTAADNPVEVAEDRELRRFLARAINTLPEREKTVVTLYY
YEGLTLAEIGNVLGVTESRVSQIHTKSVLQLRAKLASFGR
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgccccagcacacctccgggtccgaccgggcggcgatccccccagccgcccgtgacggt
ggcagcgtacggccgcccgctccctcgacgctcgacgagctgtggcggtcgtacaaggcg
acgggggacgagcggctgcgggagcagctgatcctgcactactcgccgctcgtgaagtac
gtcgcgggacgggtcagcgtgggcctgccgtccaacgtggagcaggcggacttcgtctcg
tccggggtgttcgggctgatcgacgcgatcgagaagttcgacatcgaccgggagatcaag
ttcgagacatacgcgatcacccggatccggggcgcgatgatcgacgagctgcgggcgctc
gactggatcccccgctcggtacggcagaaggcgcgcaacgtggagcgggcgtacgccacg
ctggaggcgcggctgcggcggacgccgacggagggcgaggtggccggcgagctgggtatc
gcggtggaggaactccacgcggtgttcagccagttgtcgctggccaacgtggtggccttg
gaggagctgctgcacggcgggggtgagggcggcgacgggctgagcgtgatggacacgctg
gaggacaccgccgccgacaaccccgtggaggtcgccgaggaccgggagctgcggaggttc
ctggcgcgggcgatcaacacgctgcccgagcgcgagaagaccgtggtcacgctgtactac
tacgagggcctcaccctggccgagatcgggaacgtgctgggcgtgaccgagagccgggtc
agccagatccacaccaagtcggtgctgcagctcagagcgaaactggcgagcttcggccgc
tga
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