Streptomyces koelreuteriae: KJK29_14720
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Entry
KJK29_14720 CDS
T09603
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
skg
Streptomyces koelreuteriae
Pathway
skg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
skg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KJK29_14720 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
skg03019
]
KJK29_14720 (recQ)
03400 DNA repair and recombination proteins [BR:
skg03400
]
KJK29_14720 (recQ)
Enzymes [BR:
skg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KJK29_14720 (recQ)
Messenger RNA biogenesis [BR:
skg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KJK29_14720 (recQ)
DNA repair and recombination proteins [BR:
skg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
KJK29_14720 (recQ)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
Helicase_C
RecQ_Zn_bind
SaeA_1st
Motif
Other DBs
NCBI-ProteinID:
QWB23748
UniProt:
A0ABX8FRM7
LinkDB
All DBs
Position
complement(3327548..3329575)
Genome browser
AA seq
675 aa
AA seq
DB search
MGGTGGIAEMSVTQSEALATLHRVFGYEAFRGEQEAVIEHVVAGGDSVVLMPTGAGKSLC
YQVPALVRPGTGIVVSPLIALMQDQVDALRALGVRAGFVNSTQDFDERRVVEAEFLAGEL
DLLYLAPERLRLENTLDLLSRGKISVFAIDEAHCVSQWGHDFRPDYLTLSLLGERWPDVP
RIALTATATRATHQEITERLNMPAARHFVASFDRPNIQYRVVPKADPKKQLLNFLREEHA
GDAGIVYCLSRNSVEKTAEFLSRNGVEAVPYHAGLDAGTRAAHQSRFLREDGLVVVATIA
FGMGIDKPDVRFVAHLDLPKSVEGYYQETGRAGRDGLPSTAWMAYGLNDVIQQRKLIQSG
EGDEAFRRRAQAHLDSMLALCETVQCRRGQLLAYFGQDPDPAGCGNCDTCLTPPETWDGT
VAAQKVLSTVVRLQRERGQKFGAVQIVDILLGKRTGKVIQFDHDQLSVFGIGEELAEAEW
RGVIRQLLAQGLLAVEGEYGTLVLTEGSGTVLRREQDVPLRKEPKKPVTSRSGSSSASGS
GRGKGKAAAAELPETLVPAFEALRAWRAEQAREQGVPAYVIFHDATLREIAMAWPASVAE
LGGIGGVGEKKLATYGEGVLEVLASLGGQPGPAPDQAPDGTPAQGSGRAPAQAPGPQMDG
PDDWPEMTEPEPDWI
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgggtgggacgggcggtatcgctgagatgtcagtgacgcagagcgaggcgctggccacg
ctgcaccgggtcttcgggtacgaggccttccggggcgagcaggaagcggtcatcgagcac
gtggtcgcgggcggtgactccgtcgtgctcatgccgaccggcgccggcaagtccctgtgc
taccaggtcccggccctggtccggccgggcacggggatcgtcgtctcccccctcatcgcc
ctgatgcaggaccaggtcgacgcgctgcgggcgctgggcgtgcgggccgggttcgtgaac
tccacgcaggacttcgacgagcgtcgggtggtggaggccgagttcctcgcgggcgagctg
gacctgctgtacctggcgccggagcggctgcggctggagaacacgctcgatctgctctcg
cgcggcaagatctccgtgttcgcgatcgacgaggcgcactgcgtctcccagtggggccac
gacttccggcccgactacctgacactgtcgctgctcggcgagcgctggccggacgtgccg
cggatcgccctcaccgcgacggccacacgcgccacgcaccaggagatcaccgagcggctg
aacatgccggcggcccgccacttcgtggcgagcttcgaccggcccaacatccagtaccgg
gtcgtgccgaaggcggaccccaagaagcagctgctgaacttcctgcgcgaggagcacgcg
ggcgacgcgggcatcgtctactgcctctcgcgcaactccgtggagaagaccgccgagttc
ctcagccgcaacggcgtcgaggcggtgccttaccacgcgggcctggacgcgggcacccgc
gcggcccaccagtcccgcttcctgcgggaggacggcctggtcgtggtcgcgaccatcgcc
ttcggcatgggcatcgacaagccggacgtccgcttcgtcgcccacctcgacctgcccaag
tcggtcgagggctactaccaggagacgggccgggccggccgtgacgggctgccgtcgacg
gcctggatggcctatgggctgaacgacgtcatacagcagcgcaagctgatccagtccggc
gagggcgacgaggccttccggcggcgggcccaggcccacctggactcgatgctggcgctg
tgcgagaccgtccagtgccgccggggccagctcctcgcctacttcggccaggacccggac
ccggccggctgcggcaactgcgacacctgcctgaccccgccggagacctgggacggcacg
gtcgcggcgcagaaggtgctctcgacggtggtgcggctgcagcgcgagcgcggccagaag
ttcggcgccgtgcagatcgtcgacatcctgctggggaagcggaccggcaaggtcatccag
ttcgaccacgaccagctgtcggtgttcggcatcggcgaggagctggccgaggccgagtgg
cggggcgtcatccggcagctgctggcccaggggctgctcgccgtggagggcgagtacggc
acgctggtgctgaccgagggcagcgggacggtgctgcggcgggagcaggacgtgccgctg
cgcaaggagccgaagaagccggtgacctcccggtcggggtcctcgtcggcctcgggctcc
ggacggggcaagggcaaggcggccgccgccgagctgcccgagacgctggtgccggccttc
gaggcactgcgcgcctggcgggccgagcaggcacgcgaacagggcgtcccggcctacgtc
atcttccacgacgccacgctgcgggagatcgctatggcctggccggcgtcggtggccgag
ctcggtgggatcggcggggtgggcgagaagaagctcgcgacgtacggggagggcgtgctg
gaggtgctcgcgtcactgggcgggcagcccggcccggccccggatcaggcgcccgacggg
actccggcccagggatccggccgcgctccggcccaggcgcccggcccgcagatggacggg
ccggacgactggcccgagatgaccgagccggaacccgactggatatga
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