Streptomyces koelreuteriae: KJK29_16405
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Entry
KJK29_16405 CDS
T09603
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
skg
Streptomyces koelreuteriae
Brite
KEGG Orthology (KO) [BR:
skg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
skg03032
]
KJK29_16405 (topA)
03400 DNA repair and recombination proteins [BR:
skg03400
]
KJK29_16405 (topA)
Enzymes [BR:
skg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
KJK29_16405 (topA)
DNA replication proteins [BR:
skg03032
]
Prokaryotic type
DNA Topoisomerases
KJK29_16405 (topA)
DNA repair and recombination proteins [BR:
skg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KJK29_16405 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
HC2
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
QWB24049
LinkDB
All DBs
Position
complement(3689886..3692786)
Genome browser
AA seq
966 aa
AA seq
DB search
MSPTSETAEGGRRLVIVESPAKAKTIKGYLGPGYIVEASVGHIRDLPNGAAEVPEKYTGE
VRRLGVDVEHDFQPIYVVNADKKAQVKKLKDLLKESDELFLATDEDREGEAIAWHLQEVL
KPKVPVKRMVFHEITKAAIQAAVANPRQLNQKLVDAQETRRILDRLYGYEVSPVLWKKVM
PRLSAGRVQSVATRLVVERERERIAFRSAEYWDLTGTFSPTLDFARAGGPPSGRAGDSSD
PSSLVARLQSVDGRRVAQGRDFDSLGQLKSANTLHLDEANARALAAALEQTRFAVRSVES
KPYRRSPYAPFRTTTMQQEASRKLGFGAKATMQVAQKLYENGYITYMRTDSTTLSDTAVA
AARAQVTQLYGADYLPPQPRTYAGKVKNAQEAHEAIRPSGDRFRTPAETGLTGDQFKLYE
LIWKRTVASQMKDATGNSVTVKIGGAASDGRDVEFSASGKTITFHGFLKAYVEGADDPNA
ELDDRERRLPQVSEGDALSAEEITVDGHATKPPARYTEASLVKELEEREIGRPSTYASII
GTILDRGYVFKKGTALVPSFLSFAVVNLLEKHFGRLVDYGFTAKMEDDLDRIARGEARAV
PWLKRFYFGETASDSGSAAGVEGGAADAGNGDGDHLGGLKELVTDLGAIDAREVSSFPVG
NDIVLRVGRYGPYIERGEKDTEQHQRADIPDDLAPDELSVDLAEELLAKPSGDYELGPDP
ATGHTIVAKDGRYGPYVTEILPEGTPKTGKNAVKPRTASLFKTMSLDTVTLDDALKLMSL
PRVVGADAEGQEITAQNGRYGPYLKKGTDSRSLQAEEQLFTITLEEALAIYAQPKQRGRA
AAKPPLKELGEDPVSGKPVVVKDGRFGPYVTDGETNATLRSGDSVETITQERGFELLAEK
RAKGPAKKTAKKAAKKAPAKKTTAKKTAAKKTTTAKKTTAKKTTTAKKTTAKTAAKTATA
SKPAED
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
ttgtccccgaccagcgagaccgcagagggcggccgccgactcgtcatcgtcgagtcgcct
gccaaggcgaagacgatcaagggctatctcggccccggatacatcgtcgaggcgagcgtc
gggcacatccgcgaccttcccaacggcgccgcggaggtgcccgagaagtacaccggcgag
gtccgccgcctcggtgtggacgtcgaacacgacttccagccgatctatgtggtcaacgcc
gacaagaaggcccaggtcaagaagctcaaggacctgctgaaggagtccgacgaactcttc
ctcgccaccgatgaggaccgcgagggcgaggccatcgcctggcacctccaggaagtcctg
aagcccaaggtcccggtcaagcggatggtcttccacgagatcaccaaggccgcgatccag
gccgccgtggccaacccgcgccagctcaaccagaagctcgtcgacgcccaggagacccgc
cgcatcctcgaccgcctctacggctacgaggtctcgccggtcctgtggaagaaggtcatg
ccgcggctgtccgcgggccgtgtccagtcggtcgccacacgactcgtcgtcgagcgggaa
cgcgagcgcatcgccttccgttcagctgagtactgggacctgacgggcaccttctccccc
actctcgacttcgctcgagcggggggacccccatccggccgcgccggtgactcgtcggac
ccgtcgtcgctggtcgcgcgcctgcagtccgtcgacggcaggcgggtcgcgcagggccgc
gacttcgactccctgggacagctgaagagcgcgaacaccctgcacctcgacgaggcgaac
gcccgcgccctggccgccgccctggagcagacccggttcgccgtccgctccgtcgagtcc
aagccctaccgccgctcgccgtacgccccgttccgtacgacgacgatgcagcaggaggcc
agccgcaagctcggcttcggtgcgaaggccaccatgcaggtcgcgcagaagctgtacgag
aacggctacatcacctacatgcgtacggactccacgaccctgagcgacacggcggtcgcc
gccgcccgcgcccaggtcacgcagctgtacggcgccgactacctgccgccgcagccgagg
acgtacgccgggaaggtcaagaacgcgcaggaggcgcacgaggcgatccgcccctcgggt
gatcgtttccgcactcccgccgagaccggactgaccggcgaccagttcaagctctacgag
ctgatctggaagcggaccgtcgcctcccagatgaaggacgcgaccggcaacagcgtcacg
gtgaagatcggcggcgcggcctccgacggccgggacgtcgagttcagcgcgtccggcaag
acgatcaccttccacggcttcctcaaggcctacgtcgaaggcgccgacgacccgaacgcc
gagctcgacgaccgcgagcgccggctgccccaggtctccgagggcgacgccctgagcgcc
gaggagatcacggtcgacgggcacgccaccaagcccccggcccgctacaccgaggcctcc
ctggtcaaggagctggaagagcgcgagatcggccgcccgtcgacgtacgcgtcgatcatc
ggcacgatcctcgaccgcggctatgttttcaagaagggcacggcactcgtcccgtccttc
ctgtccttcgccgtggtcaacctcctggagaagcacttcgggcggctcgtcgactacggc
ttcaccgccaagatggaggacgacctcgaccgcatcgcccgcggtgaggcgcgtgccgtg
ccgtggctgaagcggttctacttcggtgagacggcatccgacagcggctccgccgcgggc
gtcgagggcggtgccgccgacgccggcaacggcgacggggaccacctcggcggcctcaag
gagctggtgaccgacctgggcgcgatcgacgcccgcgaggtgtcgtcgttccccgtgggc
aacgacatcgtgctgcgggtcggccgctacgggccgtacatcgagcgcggtgagaaggac
accgagcagcaccagcgcgccgacatcccggacgacctggcgccggacgagctctccgtc
gacctcgccgaggaactgctcgccaagccgagcggcgactacgaactgggccccgacccg
gccaccggccacacgatcgtcgccaaggacggccgctacggcccgtatgtgacggagatc
ctccccgagggcaccccgaagacgggcaagaacgcggtcaagccgcgtacggcctccctc
ttcaagacgatgtccctggacacggtgacgctcgacgacgccctgaagctgatgtcgctg
ccgcgtgtcgtcggcgccgacgccgagggccaggagatcaccgcgcagaacggccgctac
ggcccgtacctgaagaagggcacggactcgcgctcgctccaggccgaggagcagctcttc
acgatcacgctggaagaggcgctggcgatctacgcccagcccaagcagcggggccgggcg
gccgccaagccgccgctgaaggagctgggcgaggacccggtcagcggcaagccggtcgtc
gtgaaggacggccgcttcgggccgtacgtcaccgacggggagaccaacgcgaccctgcgc
tccggcgacagcgtcgagacgatcacccaggagcgcggcttcgagctgctcgccgagaag
cgcgcgaaggggccggcgaagaagaccgccaagaaggcggccaagaaggccccggcgaag
aagacgacggccaagaagaccgcggcgaagaagaccacgaccgcgaagaagacgacggcc
aagaagaccaccacggcgaagaagacgacggcgaagacggcggccaagacggcgaccgcc
tcgaagccggcggaggactga
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