Streptomyces koelreuteriae: KJK29_20960
Help
Entry
KJK29_20960 CDS
T09603
Name
(GenBank) DEAD/DEAH box helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
skg
Streptomyces koelreuteriae
Pathway
skg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
skg00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
KJK29_20960
09124 Replication and repair
03420 Nucleotide excision repair
KJK29_20960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
skg03021
]
KJK29_20960
03400 DNA repair and recombination proteins [BR:
skg03400
]
KJK29_20960
Enzymes [BR:
skg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KJK29_20960
Transcription machinery [BR:
skg03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
KJK29_20960
DNA repair and recombination proteins [BR:
skg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
KJK29_20960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
IMD
AAA_22
ETAA1
DUF447_C
Motif
Other DBs
NCBI-ProteinID:
QWB24850
LinkDB
All DBs
Position
complement(4624734..4626377)
Genome browser
AA seq
547 aa
AA seq
DB search
MNGPLIVQSDKTLLLEVDHERADDCRRVIAPFAELERAPEHIHTYRVTPLGLWNARAAGH
DAEQVVDALVEYSRYPVPHALLVDIAETMDRYGRLTLSKHPAHGLVLTTTDRPVLEEILR
SKRITPLVGARIDPDTVAVHPSERGQIKQTLLKLGWPAEDLAGYVDGEAHAIELAEDGWA
LRPYQKQAVENFWHGGSGVVVLPCGAGKTLVGAGAMAQAKSTTLILVTNTVSARQWKHEL
VKRTSLTEEEIGEYSGTRKEIRPVTIATYQVLTTKRKGVYPHLELFDSRDWGLVVYDEVH
LLPAPVFKFTADLQARRRLGLTATLVREDGRESDVFSLIGPKRFDAPWKEIEAQGYIAPA
DCVEVRVNLTDSERLAYATAETEEKYRFCATTATKRKVTEAIVRRFDGQQILVIGQYIDQ
LDELGEHLGAPVIKGETSNAQREKLFDAFREGEISVLVVSKVANFSIDLPEATVAIQVSG
TFGSRQEEAQRLGRVLRPKSDGHQAHFYSVVARDTIDQDFAAHRQRFLAEQGYAYRIVDA
DELLADS
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
gtgaatggtccgctgatcgtccagtccgacaagaccctgctcctggaagtcgaccacgag
cgggccgacgactgccgtcgtgtcatcgcccccttcgcggagctggagcgggcgcccgag
cacatccacacctaccgggtgaccccgctgggtctgtggaacgcgcgcgcggcgggccat
gacgcggagcaggtcgtggacgcgctggtggagtacagccgctatccggtgccgcacgcg
ctgctcgtcgacatcgccgagacgatggaccgctacggccggctcaccctgtccaagcac
cccgcgcacggcctggtcctgacgaccaccgaccggccggtgctggaggagatcctgcgg
tccaagcggatcacacccctggtcggcgcccggatcgacccggacaccgtcgccgtgcac
ccctccgagcgcgggcagatcaagcagaccctgctgaagctgggctggccggccgaggac
ctcgccgggtacgtcgacggcgaggcgcacgcgatcgagctggccgaggacggctgggcg
ctgcggccgtaccagaagcaggccgtcgagaacttctggcacggcggctcgggcgtcgtc
gtcctgccctgcggcgccgggaagacgctggtcggtgccggggcgatggcccaggcgaag
tccacgacgctgatcctcgtcaccaacacggtctccgcccggcagtggaagcacgagctg
gtgaagcggacctcgctcaccgaggaggagatcggcgagtacagcgggacgcgcaaggag
atccggcccgtcaccatcgccacgtaccaggtgctgacgaccaagcggaagggcgtctat
ccgcatctggagctgttcgactcgcgggactggggcctggtcgtctacgacgaggtgcat
ctgctgcccgcgccggtcttcaagttcaccgcggatcttcaggcccggcgccgcctcggc
ctgacggccaccctggtgcgcgaggacggccgtgagtcggacgtgttctcgctgatcggg
cccaagcggttcgacgcgccgtggaaggagatcgaggcgcagggctacatcgcgcccgcc
gactgcgtcgaggtccgggtcaatctgacggactccgagcggctcgcgtacgccacggcc
gagacggaggagaagtaccgcttctgcgccacgaccgcgaccaagcggaaggtcacggag
gcgatcgtccgccgcttcgacggacagcagatcctggtgatcggccagtacatcgaccag
ctcgacgagctgggggaacacctcggggcgcccgtgatcaagggcgagacgtcgaacgcg
cagcgcgagaagctcttcgacgccttccgcgagggcgagatcagtgtgctggtggtctcc
aaggtcgcgaacttctcgatcgacctgcccgaggcgaccgtcgcgatccaggtgtcgggc
accttcggctcccgccaggaggaggcccagcgtctcggccgggtgctgcgccccaagtcg
gacggccaccaagcccacttctactccgtggtcgcccgggacaccatcgaccaggacttc
gcggcccaccggcagcgcttcctggcggagcaggggtacgcgtaccggatcgtggacgcg
gacgagctgctcgcggacagctga
DBGET
integrated database retrieval system
