Streptomyces koelreuteriae: KJK29_25605
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Entry
KJK29_25605 CDS
T09603
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
skg
Streptomyces koelreuteriae
Pathway
skg03030
DNA replication
skg03430
Mismatch repair
skg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
skg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KJK29_25605 (holA)
03430 Mismatch repair
KJK29_25605 (holA)
03440 Homologous recombination
KJK29_25605 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
skg03032
]
KJK29_25605 (holA)
03400 DNA repair and recombination proteins [BR:
skg03400
]
KJK29_25605 (holA)
Enzymes [BR:
skg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KJK29_25605 (holA)
DNA replication proteins [BR:
skg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KJK29_25605 (holA)
DNA repair and recombination proteins [BR:
skg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KJK29_25605 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
QatB
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
QWB25664
UniProt:
A0ABX8FX41
LinkDB
All DBs
Position
5675863..5676852
Genome browser
AA seq
329 aa
AA seq
DB search
MARKTANDDPLAPVTLAVGQEELLLDRAVQEVVAAARAADADTDVRDLTPDQLQPGTLAE
LTSPSLFAERKVVVVRNAQDLSADTIKDVKAYLGAPAEEITLVLLHAGGAKGKGLLDAAR
KAGAREVACPKMTKPADRLAFVRGEFRATGRSATPEACQALVDAIGSDLRELASAVSQLV
ADVEGTIDEAIVGRYYTGRAEASSFTVADRAVEGRAAEALEALRWSLATGVAPVMITSAL
AQGVRAIGKLSSARGGRPADLARELGMPPWKIDRVRQQMRGWTPDGVSVALRAVAEADAG
VKGGGDDPGYALEKAVVAIARAARSRGRG
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atggccaggaagactgcgaatgacgaccctctcgccccggtgacgctcgccgtgggccag
gaggagctgctgctcgaccgtgccgtgcaggaggtggtggccgcggcgagggccgccgac
gccgacacggacgtacgggacctgaccccggaccagttgcagcccggcacgctcgccgag
ctgacgtctccctcgctcttcgcggagcgcaaggtcgtggtcgtgcgcaacgcgcaggat
ctctcggccgacacgatcaaggacgtcaaggcctacctcggggcgcccgccgaggagatc
accctcgtgctgctgcacgccggaggggccaagggcaaggggctgctcgacgcggcgcgc
aaggccggggcgcgcgaggtggcctgccccaagatgacgaagccggcggaccggctggcg
ttcgtgcggggcgagttccgggcgacgggcaggtccgccacgccggaggcgtgccaggcg
ctcgtcgacgcgatcggcagtgatctgcgggagctggcgtcggcggtctcgcaactggtc
gcggatgtcgaggggacgatcgacgaggcgatcgtcgggcggtattacaccggccgggcc
gaggcgtcgagcttcacggtcgccgaccgggcggtcgaggggcgggcggccgaggcgctg
gaggcgttgcgctggtccctggcgaccggcgtggcaccggtgatgatcaccagcgcgctg
gcccagggcgtccgggcgatcggaaagctctcctcggcccgcggaggccggccggcggat
ctcgcccgcgagctggggatgccgccctggaagatcgaccgggtccggcagcagatgcgc
ggctggaccccggacggcgtgtccgtggcgctgcgagcggtggccgaggcggacgcggga
gtaaagggcggcggcgacgacccggggtacgccctggagaaggcggtggtcgccatcgcc
cgggcggcccggtcccgggggcggggctag
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