Streptomyces koelreuteriae: KJK29_28980
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Entry
KJK29_28980 CDS
T09603
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
skg
Streptomyces koelreuteriae
Pathway
skg03030
DNA replication
skg03410
Base excision repair
skg03420
Nucleotide excision repair
skg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
skg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KJK29_28980 (polA)
03410 Base excision repair
KJK29_28980 (polA)
03420 Nucleotide excision repair
KJK29_28980 (polA)
03440 Homologous recombination
KJK29_28980 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
skg03032
]
KJK29_28980 (polA)
03400 DNA repair and recombination proteins [BR:
skg03400
]
KJK29_28980 (polA)
Enzymes [BR:
skg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KJK29_28980 (polA)
DNA replication proteins [BR:
skg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
KJK29_28980 (polA)
DNA repair and recombination proteins [BR:
skg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
KJK29_28980 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KJK29_28980 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
DNA_pol_lambd_f
HHH_5
HHH_2
NYN_YacP
Motif
Other DBs
NCBI-ProteinID:
QWB26277
LinkDB
All DBs
Position
6439484..6442210
Genome browser
AA seq
908 aa
AA seq
DB search
MAETAAKTTDKTSGGSRPRLMLMDGHSLAYRAFFALPAENFTTATGQPTNAIYGFASMLA
NTLRDEEPTHFAVAFDVSRKTWRSQEFTEYKANRSKTPDEFKGQVELIGELLDAMGAARF
AVDGFEADDVIATLATQAEAEGFEVLIVTGDRDSFQLVSEHTTVLYPTKGVSELTRFTPE
KVFEKYGLTPAQYPDFAALRGDPSDNLPGIPGVGEKTAAKWINQFGSFADLVERVEEVKG
KAGQNLRDHLEAVKLNRRLTELERQVELPKGVTDLERAAYDRTAVAVVLDTLEIRNPSLR
ERLFAVDPGAEEAETTPVSTEGVELDGKVLGTGELTAWLTEHGTGPLGIATVDTWALGTG
SVAEIALAAPGGPAAWFDPSQLDEADETAFAAWLADAERPKTFHNAKGAMRVFAEHGWSV
EGVRMDTALAAYLVKPGRRSFDLDALSLEYLHRELTPAAAADGQLAFGADEGAEAEALMI
QARAVLDLGQAFEGRLEEVGAADLLRDMELPTSALLARMERHGIAADRAHLEAMEQMFAG
AVQQAVKEAHAAAGHEFNLGSPKQLQEVLFGELALPKTKRTKTGYTTDADALAWLAGQTD
NELPVIMLRHREQAKLRVTVEGLIKTIAADGRIHTTFNQTVAATGRLSSTDPNLQNIPVR
TDEGRAIRRGFVVGEGFESLMTADYSQIELRVMAHLSEDEGLIEAFTSGEDLHTTAASQV
FAVEPTAVDAEMRRKIKAMSYGLAYGLSAFGLSQQLNIEAAEARALMDAYFERFGGVRDY
LRRAVDEARATGYTATLFGRRRYLPDLNSDNRQRREAAERMALNAPIQGTAADIVKIAML
KVGRALEEAGLESRMLLQVHDEVVLEIAPGERAAAEELVRREMADAVHLRVPLGVSVGAG
ADWESAAH
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
gtggcagagacagcagcgaagacgaccgacaagacctccggcggcagccgcccacgactg
atgctcatggacgggcactcgctggcctaccgcgcgttcttcgcgctgcccgcggagaac
ttcaccaccgcgacgggccagccgacgaacgcgatctacggcttcgcgtcgatgctggcc
aacacgctgcgcgacgaggagcccacacacttcgcggtcgccttcgacgtctcccgcaag
acctggcggtcccaggagttcacggagtacaaggcgaaccgctccaagaccccggacgag
ttcaagggccaggtcgagctgatcggcgagctcctcgacgcgatgggcgccgcccgcttc
gcggtggacggcttcgaggcggacgacgtcatcgccactctcgccacccaggccgaggcc
gagggcttcgaggtgctgatcgtcaccggcgaccgggattccttccagctcgtcagcgag
cacaccacggtgctgtacccgaccaagggcgtctccgagctgacccgcttcaccccggag
aaggtattcgagaagtacggattgacgcccgcgcagtaccccgacttcgcggccctgcgc
ggcgacccctccgacaacctccccggcatccccggcgtcggcgagaagaccgccgcgaag
tggatcaaccagttcggctccttcgcggacctcgtcgagcgcgtcgaggaagtcaagggc
aaggccggccagaacctccgcgaccacctcgaagcggtcaagctcaaccgccgcctcacc
gagctggagcggcaggtcgagctccccaagggcgtcaccgacctggagcgggccgcctac
gaccgcacggccgtcgcggtggtcctggacaccctggagatccgcaacccctcgctgcgc
gagcggctcttcgccgtcgaccccggcgccgaggaggccgagaccaccccggtcagcacg
gagggcgtggagctggacggcaaggtgctcggcaccggcgagctgaccgcctggctcacc
gagcacggcaccgggcccctcggcatcgccacggtcgacacctgggcgctcggcaccggc
tccgtcgccgagatcgcgctcgccgcgcccggcggaccggccgcctggttcgacccctcc
cagctcgacgaggccgacgagacggccttcgccgcctggctcgccgacgccgagcggccc
aagaccttccacaacgccaagggcgccatgcgcgtcttcgccgagcacggctggagcgtc
gagggcgtgcgcatggacaccgcgctcgccgcctacctggtcaagccgggccgccgctcc
ttcgacctggacgcgctgtccctggagtacctgcaccgcgagctgaccccggccgccgct
gccgacggccagctcgccttcggcgcggacgaaggcgccgaggccgaggccctgatgatc
caggcccgtgccgtcctcgacctgggccaggccttcgagggccgcctggaggaggtcggc
gccgccgatctcctgcgcgacatggagctgcccacgtccgcgctgctcgcccgcatggag
cggcacggcatcgcggccgaccgggcccatctggaggccatggagcagatgttcgccggc
gccgtccagcaggcggtgaaggaggcccacgcggcagccgggcacgagttcaacctgggc
tcgcccaagcagctccaggaagtcctcttcggtgagctggccctgcccaagaccaagcgc
accaagaccggctacaccacggacgccgacgccctcgcctggctcgccggccagacggac
aacgagctgccggtgatcatgctccgccaccgcgagcaggccaagctccgggtcaccgtc
gagggcctgatcaagacgatcgccgcggacggccggatccacaccaccttcaaccagacg
gtcgccgccaccggccgcctgtcctcgacggacccgaacctgcagaacatcccggtccgc
accgacgagggccgcgccatccgccgcggcttcgtcgtcggcgagggcttcgagtccctg
atgacggccgactacagccagatcgaactgcgcgtgatggcccacctctccgaggacgag
ggcctgatcgaggccttcacctcgggcgaggacctgcacaccacggccgcctcccaggtc
ttcgcggtcgagccgaccgccgtggacgccgagatgcgccgcaagatcaaggccatgtcg
tacggcctggcctacggactgtccgccttcggcctctcccagcagctgaacatcgaggcg
gccgaggcccgcgccctgatggacgcgtacttcgagcggttcggcggcgtacgggactat
ctgcgccgcgcggtcgacgaggcccgggccacgggctacacggcgacgctcttcgggcgc
cgccgctacctccccgacctcaacagcgacaaccgccagcgtcgcgaggcggcggagcgg
atggccctcaacgcgcccatccagggcacggcggccgacatcgtgaagatcgccatgctc
aaggtgggccgcgctctggaggaggccgggctggagtcccggatgctgctccaggtgcac
gacgaagtcgtactggagatcgccccgggcgagcgcgcggccgccgaggaactcgtccgc
cgcgagatggccgacgcggtgcacctccgcgtcccgctgggcgtctcggtgggcgcgggg
gcggactgggagtcggcggcacactag
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integrated database retrieval system
