Streptomyces koelreuteriae: KJK29_29775
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Entry
KJK29_29775 CDS
T09603
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
skg
Streptomyces koelreuteriae
Pathway
skg00040
Pentose and glucuronate interconversions
skg01100
Metabolic pathways
skg02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
skg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
KJK29_29775
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
KJK29_29775
Enzymes [BR:
skg01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
KJK29_29775
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Pectate_lyase_5
Motif
Other DBs
NCBI-ProteinID:
QWB26428
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Position
6610140..6611450
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AA seq
436 aa
AA seq
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MKNPKCHDHVIGRAALLVGCTALVLSLSGTGAQAQARDVARQTLGANDGWGAYGTGTSGG
AAADAAHVYTVTTWEQFKAALKDGGTAPRIIKVKGMIDAVSQGCEAFEAEGYDFQQYLAD
YDPAVWGHDKPVSGVQEDLRAASAAQQDKIIKASVPANTTIIGVGKNSGILGGSLQIKGV
DNVIVRNLTIEAPVDCFPQWDPTDDNKTGAWNSEYDGVVVYGSTHVWIDHNTLTDGRYPD
SSLPSYFGKTYQQHDGLADVVRGSNHVTVSWNSFKDHDKTMLIGNSDSATADDTGKLKVT
LHHNRFEGIVERAPRVRFGQVDSYNNHFVVTKAQKWGYVYGIGKESRLVAEHNAFTLAQG
ISTGKILKKWNEAPVTAGSNYVNGKAVDLIAVHNAEIPGETLQSGAGWTPTLRAGVDPAK
AVPGIVDAGAGAGRVC
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
gtgaagaatccgaagtgtcatgatcacgtcattggaagagccgccctcctggtcgggtgc
accgcgctcgtgctgtccctgagcgggaccggcgcgcaggcccaggcgcgggacgtggcg
cgccagaccctcggggcgaacgacggatggggcgcctacggcaccggcaccagcggaggt
gccgccgccgatgccgcgcacgtctacaccgtcaccacctgggagcagttcaaggccgcc
ctgaaggacggcggcaccgcgcccaggatcatcaaggtgaagggcatgatcgacgccgtt
tcgcaggggtgcgaggcgttcgaggccgagggctacgacttccagcagtacctcgcggac
tacgaccccgccgtctgggggcacgacaagccggtcagcggtgtgcaggaggacctgagg
gccgcgtccgccgcccagcaggacaagatcatcaaggcgagcgtccccgccaacaccacg
atcatcggcgtgggcaagaactccgggatcctcggcggcagccttcagatcaagggcgtc
gacaacgtcatcgtccgcaacctcaccatcgaggccccggtcgactgcttcccgcagtgg
gacccgaccgacgacaacaagaccggcgcctggaactccgagtacgacggggtcgtcgtc
tacggctccacccatgtgtggatcgaccacaacaccctcaccgacggccgctaccccgac
agctccctgccgtcctacttcggcaagacctatcagcagcacgacgggctggccgacgtc
gtgcgcggctccaaccatgtgacggtgtcctggaactcgttcaaggaccatgacaagacc
atgctgatcggcaacagcgacagcgccacggccgacgacaccggcaagctgaaggtcacg
ctgcaccacaaccgcttcgagggcatcgtcgagcgggcgccgcgggtgcggttcgggcag
gtcgactcgtacaacaaccacttcgtggtcaccaaggcccagaagtggggctatgtctac
ggcatcggcaaggagtcccggctcgtcgccgagcacaacgcgttcacgctcgcgcagggc
atcagcacggggaagatcctcaagaagtggaacgaggcgccggtcaccgccggttccaac
tacgtcaacggcaaggccgtcgacctgatcgccgtgcacaacgcggagatccccggggag
acgctccagtcgggtgccggctggacgccgaccctgcgggccggtgtcgacccggcgaag
gcggtcccgggcatcgtcgacgccggggcgggcgccggccgcgtgtgctga
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