Streptomyces koelreuteriae: KJK29_31180
Help
Entry
KJK29_31180 CDS
T09603
Name
(GenBank) DEAD/DEAH box helicase
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
skg
Streptomyces koelreuteriae
Brite
KEGG Orthology (KO) [BR:
skg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
skg03019
]
KJK29_31180
Enzymes [BR:
skg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
KJK29_31180
Messenger RNA biogenesis [BR:
skg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
KJK29_31180
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
SH3_HelY
DEAD
ResIII
Helicase_C
DEXQc_Suv3
MTR4-like_stalk
AAA_22
nSTAND_NTPase5
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
QWB26691
UniProt:
A0ABX8FZL7
LinkDB
All DBs
Position
6918937..6921786
Genome browser
AA seq
949 aa
AA seq
DB search
MIVLLSVRPGTLESTMTEDLSPAERYAAARKRAVEQATALASFREMYDFGLDPFQIEACQ
ALEAGKGVLVAAPTGSGKTIVGEFAVHLALQQGKKCFYTTPIKALSNQKYADLCRRYGTD
KVGLLTGDNSVNSDAPVVVMTTEVLRNMLYAGSQTLLGLGYVVMDEVHYLSDRFRGAVWE
EVIIHLPESVTLVSLSATVSNAEEFGDWLDTVRGDTEVIVSEHRPVPLFQHVLAGRRMYD
LFEEGEGHKKAVNPDLTRMARMEASRPSYQDRRRGRSMREADRERDRRQRSRVWTPSRPE
VIERLDAEGLLPAITFIFSRAACEAAVQQCLYAGLRLNADEARGRVRALVEERTSSIPTE
DLHVLGYYEWLEGLERGIAAHHAGMLPTFKEVVEELFVRGLVKAVFATETLALGINMPAR
SVVLEKLVKWNGEQHADITPGEYTQLTGRAGRRGIDVEGHAVVLWQRGSSPEHLAGLAGT
RTYPLRSSFRPSYNMAVNLVEQFGRHRSRELLETSFAQFQADKSVVGISRQVQRNEEGLE
GYKASMTCHLGDFEEYARLRRELKDRENDLARQGAAQRRAEAAVALEKLKPGDIIHVPTG
KYAGLALVLDPGLPAGRSNGHRGFEHHDGPRPLVLTAERQVKRLASMDFPVPVEPLERMR
IPKSFNPRSPQSRRDLASALRTKAGHIPADRHRKRRSQAADDREIARLRTELRAHPCHGC
DDREDHARWAERYHRLLRDTGQLERRIEGRTNTIARTFDRIVALLTELDYLRADEVTEHG
KRLARLYGELDLLASECLREGVWEGLGPAELAGCVSALVYEARAADDAMAPKLPSGKAKA
ALGEMVRIWGRLDALEEEFRITQTEGVGQREPDLGFAWAAYMWASGAGLDEVLREAEMPA
GDFVRWCKQVIDVLGQIAAAAPQGSSVVKNARKAVDLLLRGVVAYSSVG
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtcctgttgtcagtgcggcccggtacgctcgaaagcacgatgacagaggacctc
tcaccggccgagcggtacgcggcagcccgcaagcgtgctgtcgagcaggccaccgcgctc
gcctccttccgcgagatgtacgacttcggcctcgaccccttccagatcgaggcctgccag
gcgctcgaggcgggcaagggcgtcctggtcgccgcacccaccggctcgggcaagacgatc
gtgggcgagttcgccgtccacctcgctctccagcagggcaagaagtgcttctacacgaca
cccatcaaggcgctgtcgaaccagaagtacgccgacctgtgccgccgctacggcacggac
aaggtgggcctgctcaccggcgacaacagcgtcaactccgacgccccggtggtcgtgatg
accaccgaggtgctgcggaacatgctgtacgccggttcgcagaccctcctgggcctcggc
tacgtggtcatggacgaggtgcactacctctccgaccggttccggggcgccgtctgggaa
gaagtgatcatccacctccccgagtcggtcacgctcgtgtcgctgtcggcgaccgtgtcg
aacgccgaggagttcggcgactggctcgacacggtccgcggtgacaccgaggtgatcgtc
tccgagcaccggcccgtgccgctgttccagcacgtgctcgccgggcggcggatgtacgac
ctgttcgaggagggcgagggccacaagaaggccgtcaaccccgacctcacccgcatggcg
cgcatggaggcgagccggccgtcgtaccaggaccgccgccgtggccggtccatgcgcgag
gccgaccgcgagcgcgaccgcagacagcgctcccgggtgtggacgccgagccggcccgag
gtcatcgaacggctcgacgccgaggggctgctgcccgccatcaccttcatcttcagccgt
gccgcctgcgaggccgccgtccagcagtgcctgtacgcgggcctcaggctcaacgccgac
gaggcccgcggtcgggtccgcgcgctcgtcgaggagcgcacgtcgtccatcccgaccgag
gacctgcatgtcctcgggtactacgaatggctggagggcctggagcgcggcatcgccgcc
caccacgcggggatgctgccgaccttcaaggaggtcgtcgaggagctcttcgtacgcggc
ctggtcaaggccgtgttcgcgaccgagaccctcgccctcggcatcaacatgcccgcccgc
tcggtggtgctggagaagctcgtcaagtggaacggcgagcagcacgcggacatcaccccg
ggcgagtacacacagttgacggggcgtgcggggcgacgcggcatcgatgtcgagggccac
gcggtggtgctctggcagcgcggttcgagccccgagcacctcgccggtctggccgggacg
cgcacctacccgctgcgctccagcttcaggccgtcgtacaacatggccgtcaacctggtc
gagcagttcggccggcaccgttcgcgcgagctgctggagacgtccttcgcgcagttccag
gcggacaagtcggtcgtcggcatctcccgccaggtacagcgcaacgaggagggtctggag
ggctacaaggcctcgatgacctgccacctcggcgacttcgaggagtacgcgcggctgcgc
cgcgaactgaaggaccgtgagaacgacctggcgcggcagggcgcggcacagcggcgcgcc
gaggccgccgtcgcgctggagaagctgaagcccggtgacatcatccatgtgcccaccggc
aagtacgcgggcctggcgctggtgctggacccgggcctgcccgcgggccggtcgaacggc
caccggggcttcgagcaccacgacgggccgcgcccgctggtgctgaccgccgagcggcag
gtgaagcggctggcgtccatggacttcccggtgccggtcgagccgctggagcggatgcgg
atcccgaagtccttcaacccgcgttccccgcagtcccgtcgggacctcgcctccgcgctg
cgcaccaaggccgggcacatcccggccgaccggcaccgcaagcggcgctcccaggcggcc
gacgaccgcgagatcgcccggctgcggaccgagctgcgcgcgcacccctgccacgggtgc
gacgaccgtgaggaccacgcccgttgggccgagcgctaccaccgcctgctgcgggacacc
gggcagctggagcggcgcatcgagggccgtacgaacaccatcgcgcggaccttcgaccgt
atcgtcgcgctgctgaccgagctcgactatctgcgcgccgacgaggtcaccgagcacggc
aagcggctcgcgcggctctacggcgagctggacctgctcgccagcgagtgcctgcgcgag
ggcgtctgggaagggctcggtccggccgaactggcgggctgcgtctcggcgttggtgtac
gaggcgcgtgcggcggacgacgcgatggcgccgaagctgccgtcggggaaggccaaggcc
gcgctgggcgagatggtgcggatctgggggcggctggacgcgctggaggaggagttccgg
atcacccagaccgagggtgtcgggcagcgtgagccggacctggggttcgcctgggccgcg
tacatgtgggcctccggggcggggctggacgaggtgctgcgcgaggcggagatgccggcg
ggggacttcgtgcggtggtgcaagcaggtcatcgatgtgctggggcagatcgcggcggcg
gcgccgcaggggtcttccgtggtgaagaacgcgcgtaaggctgttgatctgttgctgcgg
ggggttgtcgcctactcgtcggtggggtga
DBGET
integrated database retrieval system
