Shewanella khirikhana: STH12_00190
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Entry
STH12_00190 CDS
T06711
Symbol
msbA_1
Name
(GenBank) Lipid A export ATP-binding/permease protein MsbA
KO
K24821
ATP-binding cassette, subfamily B, heavy metal transporter
Organism
skh
Shewanella khirikhana
Pathway
skh02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
skh00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
STH12_00190 (msbA_1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
skh02000
]
STH12_00190 (msbA_1)
Transporters [BR:
skh02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
STH12_00190 (msbA_1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_21
AAA_22
AAA_29
AAA_16
ABC_ATPase
RsgA_GTPase
AAA_10
MMR_HSR1
DUF973
DUF815
AAA_30
DUF87
Septin
Zeta_toxin
Roc
Motif
Other DBs
NCBI-ProteinID:
AZQ09342
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Position
229753..231537
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AA seq
594 aa
AA seq
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MRPSAYFEGPIDKLNWKVLKLLWPYLLEFKGRILLALSCLVVAKLASVGMPFLLKELVDG
MDEGRAQALVAVPIGLVLAYGGARLLMALTGEIRDTLFGRVTERAIRRLGLAVFEHLHRL
DLDFHLERRTGGLSRDIERGTSGVSFLMRFMVFNIVPTLLEIGLVVGIFFVKYGWQFAAI
TLASVVAYIGFSVVATEWRTGYVREAAKADSISNTRAIDSLLNYETVKYFNNEKYEADHY
DKALETWETAKRNNRLSLFALNGGQAFIIAAAMTAMMALAASQVTESKMTLGDFVLINAF
MMQLFMPLNFLGFVYREIRGALANIERMFGLLDQTPKILNKDTAQAFQCRRGEVRFEQVS
FRYDERPILNEVSFTLAPGEKVAVVGDSGAGKSTLIKLLFRFYDVSGGRILIDGVDIRDM
TQDSLRRAIAIVPQDTVLFNDSLLENIRYGRPGASDDEVREVIQHAHLAEFVASLPQGLE
TKVGERGLKLSGGEKQRVAIARAMLKGSPILVFDEATSSLDSRSEKAILDALREVAVGHT
SLVVAHRLSTIVDADRIVVLSQGKIAEQGSHSELLAKGGLYSRLWHIQHEQKMK
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgcgtccatctgcctatttcgaaggtcccatcgataaactcaattggaaagtgcttaag
ctgctctggccgtatttactggagttcaaggggcgcattttgctggcactgtcctgtctg
gtggtggccaagcttgccagtgttggcatgccgttcctgcttaaggagctggtggatggt
atggatgagggacgggctcaggcgctggtggctgtgcccattggcctggtgctggcttat
ggcggcgcgcgtttgttgatggcgctgaccggggagatccgcgacaccctgtttggccgg
gtaaccgagcgggccatccggcggctggggctcgcggtgtttgagcatttacaccggctg
gacctggattttcaccttgagcggcgcaccggcggtctgtcgcgggacatagaacgtggc
accagtggcgttagcttcctgatgcgttttatggtgttcaacatagtgccgaccttgctg
gaaatcggcttggtggtgggcattttcttcgtaaaatatggctggcagttcgccgccatt
accctggcatccgtggtggcctacatcggtttcagcgtggtggcaaccgagtggcgtacc
ggctacgtgcgcgaggccgccaaggccgactccatttccaacacccgcgccatcgacagc
ttgctgaactacgaaaccgtaaaatacttcaacaacgaaaagtacgaagccgatcactac
gacaaggcgctggaaacctgggaaactgccaagcgtaacaaccgtttgtcgctgtttgcc
ctgaacggtggtcaggcttttattatcgccgccgccatgacggccatgatggccctggct
gcatctcaggtcaccgagagcaagatgaccctcggtgactttgtgctgataaacgccttt
atgatgcagctgtttatgccgctgaacttcctgggatttgtgtaccgtgaaatccgcggt
gcgcttgccaatatcgagcgcatgtttgggctgctggatcagactccgaagattttgaat
aaagacacagcacaggcatttcagtgccggcgcggcgaggtgcgttttgagcaggtgtcc
ttccgttatgacgagcgccctatcctcaacgaggtgagttttaccctggctccgggcgaa
aaggtggcggtggtcggcgacagcggcgccggtaaatctaccctgattaagctgctgttc
cgcttttacgatgtcagtggcgggcgtattttaatcgatggcgtcgatatccgggacatg
acccaggacagcctgcgccgcgccatcgccatcgtgccccaggacacagtgctgtttaac
gactcgctgctggaaaacatccgctatggtcgcccgggcgccagcgatgatgaagtgcgg
gaagtgattcaacatgcccatctggccgagtttgtggcctccttgccccaagggctcgag
accaaggtgggtgagcgaggacttaaactctccggcggtgaaaagcagcgggtggccatt
gccagggccatgctcaagggctcgcccattctggtgtttgatgaagccacttcgtcgctg
gacagccgctccgagaaagccattcttgatgccctcagggaagtggcggtggggcacacc
agtctggtggtcgcccacaggctgtcgaccatagtggatgccgaccgtattgtggtgctc
agtcagggcaaaattgctgaacagggcagccacagtgaactgctcgccaaaggcggtttg
tacagccgtctgtggcacattcagcatgaacaaaagatgaagtga
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