Shewanella khirikhana: STH12_00223
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Entry
STH12_00223 CDS
T06711
Symbol
gbpA_1
Name
(GenBank) GlcNAc-binding protein A
Organism
skh
Shewanella khirikhana
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_19
CBM_5_12
PKD_4
He_PIG
Sde0182_C
Motif
Other DBs
NCBI-ProteinID:
AZQ09375
UniProt:
A0A3Q9E3E7
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Position
275263..277257
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AA seq
664 aa
AA seq
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MNKLSILAGAMGALLTASLYAADLYDINKAYGGGSQVSFNGKLYEAKWYANPGQSPGNSY
PNEWDNPWSLVGDDPGDTGGASGGTDSGGGTENGGGTESGGAGGSGGANADGTVTMTAAE
VAAKEASLTDFPLMHAVKASIATRDNAIVEAVLPGRAENPANVKRLEAILPEAEFEFIFP
VRAPEYSYRGLLQAAAKFPALCGDYDDGRNAEAICRKSLATMFAHFAQETGAHDVWRPEP
EWRQGLYWVREVGWDETKRGGYNAECSPGTWQGQEWPCGTFANGEYKSYFGRGAKQLSYN
YNYGPFSEAMFGTVRTLLDSPELVADSWLNLASAVFFFSYPQPPKPSMLHVIDGTWQPNA
QDLAANLTPGFGVTTMIINGGIECGQGTEKPQSANRIEYYRAHAANLGVPVADSEVLGCK
DMKAFAVGGSGAMNIYWEQDWSYVPGNPNGGKSYACKLVGYQTRFSAFRDGDYGRCLSHF
FPELVIEAGDGSGGGGDNGGGNNGGGEPANQPPLAKISGPSEADSGASVQLSAKQSSDPE
GKALSFAWSLPAGVTADSVDGALITLSLPEVSADTSLNIGVTVADPEGASHSVSHGLLLK
AGTGETPAYPGYQPGANYQAGSRVSNQGKNYECKPYPYSGWCSGSAWAYEPGVGAYWSDA
WQAL
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgaataaattatcgattttggcaggcgctatgggcgcactgctcacggccagcctgtat
gcggctgacttgtacgacatcaataaagcctatggcggcggcagccaggtcagcttcaat
ggcaagctctatgaggccaaatggtatgccaaccccggacaaagtccgggcaacagctat
cccaacgaatgggataatccctggagcctggttggggacgacccgggagataccggcggc
gcgagcggcggtacagattctggcggtggcacagagaacggcggtggcacagagagcggc
ggcgcaggtggtagtggcggcgccaatgccgatggcactgttaccatgacggctgccgag
gtggcggcgaaagaggcgagtcttaccgacttccccctgatgcatgccgttaaagcctcc
atcgccacccgcgacaatgccattgttgaggctgttctccccggccgcgccgaaaatcca
gccaacgtgaagcggctcgaggcgatactgcctgaagccgagtttgagtttatcttcccg
gtccgggcgccggagtatagctaccgcggcctgttgcaggcggcggccaagtttccggcg
ctctgcggtgactatgatgatggccgtaatgccgaggccatttgccgcaagtcgttggca
accatgttcgcccattttgcccaggaaaccggtgcccatgatgtgtggcgccctgagcca
gagtggcgtcaggggctttattgggtgcgggaagtgggctgggatgaaaccaagcgtggc
ggctacaacgccgagtgcagcccgggtacctggcaggggcaggagtggccctgtggcacc
ttcgccaacggtgaatacaaaagttactttggccgcggcgccaagcagttgtcgtacaac
tataactatggccccttctcagaggccatgttcggcactgtgcgcaccctgctcgacagc
ccggagttagtggctgacagctggctcaacctcgccagcgcggtgtttttctttagctat
ccccagccgcccaagccgtcgatgctgcatgtgatagatggcacctggcagcccaatgcc
caggatctggccgccaatctgaccccgggatttggcgtgaccaccatgattatcaatggt
ggcatcgagtgcgggcagggcacagagaagcctcagtctgccaaccgtatcgagtattac
cgtgcccatgcggccaatctcggtgtgccggttgccgattctgaggtgctgggctgtaag
gatatgaaggcctttgccgtgggcggcagcggcgccatgaacatctattgggagcaggac
tggagttatgtgcccggcaatcccaatggcggcaagagctatgcctgtaagctggtgggc
tatcaaacccgtttcagcgccttccgcgatggggattatggccgctgtctgagccacttc
ttcccggaactggtgattgaggcaggcgatggctccggtggcggtggagacaatggcggt
gggaataacggcggcggtgagccagccaatcagccaccactggcgaaaatcagtggtcca
tccgaggctgacagcggcgcttcggtgcagctgtcggcgaagcaatccagcgatcctgaa
ggcaaagcgttaagcttcgcctggagtttaccggcgggcgtgacggcagacagtgtcgat
ggcgcgctcatcaccctgtcgttgcctgaggtaagcgccgataccagcttgaacataggt
gtgacagtcgcagatcccgaaggcgcgagccacagtgtcagccatgggctgctgctgaag
gcgggcaccggggaaacaccagcctatcctggctatcagccaggcgcgaattatcaggcc
ggcagccgggtcagcaatcagggcaaaaactatgagtgtaagccatacccttacagcggc
tggtgcagtggttcagcctgggcctatgagccaggggtaggtgcctattggagcgatgcc
tggcaggcgttgtaa
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