Shewanella khirikhana: STH12_00230
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Entry
STH12_00230 CDS
T06711
Symbol
cmpR_1
Name
(GenBank) HTH-type transcriptional activator CmpR
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
skh
Shewanella khirikhana
Brite
KEGG Orthology (KO) [BR:
skh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
skh03000
]
STH12_00230 (cmpR_1)
Transcription factors [BR:
skh03000
]
Prokaryotic type
Helix-turn-helix
LysR family
STH12_00230 (cmpR_1)
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GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like
HTH_30
Motif
Other DBs
NCBI-ProteinID:
AZQ09382
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Position
285915..286892
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AA seq
325 aa
AA seq
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MINPRLKHLSMRLLEVFITVVRLGKVSAAARSLHLTQPTVSLQLKKMAELVGEPLLESRD
GNMVPTEVGAEVYRAACDVLSRLDDLDSYLGGIREGSSGHIRIGLVTTAKYVMPRILGPF
YRRFPGVQVTLSIGNRAHVLNRFEQQEDDLYLFSHPPAGERVLASRIISNPLRLIAPADH
WAVGQKGLSFDALKTERFIMREPGSATRMMFESWLSARGIELSDTMQIESNEAIRLSVAS
GLGLSVISAHTLSEGDMGPEKPTVLDVADFPLRSNWYLVARRDKRLPQSALRLIRFMAEN
LGDCIDPRYVADNIESLDQVFTQTR
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgatcaatccccgactcaaacacctcagcatgcggttgctggaagtgttcattactgtg
gttcgtcttggcaaggtgtcggcagcggcgcgcagcttgcaccttacccagccaacagtg
tcgttgcagctgaaaaaaatggccgagctggtgggggagccactgcttgagagccgcgat
ggcaacatggtgcccaccgaagtgggcgcggaggtatatagggcggcctgcgatgtgctg
tcgcggctggatgatctggacagctaccttggcgggatccgcgaaggtagctccggccat
atccgcattgggctggtaaccaccgccaagtacgtgatgccacggatcctggggcccttt
tatcgccgcttccccggggtgcaggtcaccctgagcataggtaaccgtgcccacgtgctg
aatcgttttgagcagcaggaagacgatttgtacctcttcagtcacccgccggccggtgag
cgggtgttggcgtcacggatcatttccaacccgctgaggttgattgcaccggcggatcac
tgggccgtggggcaaaaaggcttgagttttgatgctcttaagactgagcgctttattatg
cgcgagccgggctcggcaacccggatgatgtttgaaagctggctcagtgcccgagggatt
gagctcagtgacaccatgcaaatcgagagcaacgaagcgatacgcctcagcgtggcttcg
gggcttgggctgtcggtcatttcggcccataccctcagcgaaggggacatggggccggag
aaacccacggtactggatgtggcggattttcccctgcgcagcaactggtatctggtggct
cgacgcgataagcgtttgccccagagtgcgctgcggcttatccgttttatggccgaaaat
ctgggggattgtatcgaccccagatacgtggccgacaatattgagtcgctggatcaggtg
tttacccaaacccgctga
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