KEGG   Shewanella khirikhana: STH12_00311
Entry
STH12_00311       CDS       T06711                                 
Symbol
cdhR_1
Name
(GenBank) HTH-type transcriptional regulator CdhR
  KO
K13633  AraC family transcriptional regulator, transcriptional activator FtrA
Organism
skh  Shewanella khirikhana
Brite
KEGG Orthology (KO) [BR:skh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:skh03000]
    STH12_00311 (cdhR_1)
Transcription factors [BR:skh03000]
 Prokaryotic type
  Helix-turn-helix
   AraC family
    STH12_00311 (cdhR_1)
SSDB
Motif
Pfam: HTH_18 HTH_AraC DJ-1_PfpI
Other DBs
NCBI-ProteinID: AZQ09463
LinkDB
Position
372366..373370
AA seq 334 aa
MRSGVVKVDSAAGHQLLILVPPQVSLFELGCAAELFALPRPELHHWYQTRFMRWQDEDGL
AGDAGSSPVPATGGLGLSVQSGNRFDGVDILVVPSWPVDVAPPPSLLMAIRRFFEGGGRL
ISFCSGAFLLAEAGVLDGKVASTHWRYGAAFRERFANVTVQDEVLYTFDGRIGCSAGSAA
ALDLGLALIRHDFGREVANQVARRLVLSPHRSGGQAQFVQTPMPSRPDAFAATLDWALSR
LDNAISVEELAAKSHMSRRSFDRRFRLATGTSPKLWLLQHRLDRAKRLLEETNLGLDAVA
AQAGLGQALNLRLHFQKQLGITPSQYRRQFSRCV
NT seq 1005 nt   +upstreamnt  +downstreamnt
atgcgttctggcgttgtaaaagttgattcagctgctggccatcagctgctgatcctggtg
ccgccgcaggtgtcgctgttcgagcttggctgcgccgccgagctgtttgcgctgccaagg
cccgaactgcaccactggtatcaaacacgctttatgcgttggcaggatgaagacggcctt
gcaggcgatgctggcagctcgccggtgcccgccaccggcggccttgggctaagcgtccaa
agcggtaatcgcttcgatggggtcgatatcctggtggtgccgagctggcctgtggatgtg
gcgccgcccccatcgctgctgatggccatacggcgcttttttgagggcggtggcaggctg
atttcattttgctccggcgcctttttgctggccgaagctggggtgcttgatggcaaagtc
gccagcacccattggcgctatggcgcagctttcagggaaaggtttgccaatgtaactgtg
caggatgaggtgctttacaccttcgatggccgtatcggctgctcggccggcagcgcggcg
gcattggacttggggctggcattgatccgccacgactttggccgtgaggtggccaatcag
gtagccaggcggctggtgctgtcgccccaccgcagtggcggtcaggcgcagtttgtgcaa
accccgatgccaagtcgccccgatgcgtttgccgctaccctggactgggcgttatcaagg
ctcgataacgccatcagtgtggaagagttggcggcaaagagccatatgtcgcgccgcagt
tttgaccggcgcttcaggcttgccacaggtaccagccccaagctgtggctgttgcagcac
cggctggatagggccaaacggctgttggaagaaaccaatctggggctggatgccgtggca
gctcaagcggggcttggtcaggcgctgaatttacggctgcattttcaaaagcagctgggc
attacgcccagccagtatcggcgccagttttcccgctgtgtatag

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