Shewanella khirikhana: STH12_00311
Help
Entry
STH12_00311 CDS
T06711
Symbol
cdhR_1
Name
(GenBank) HTH-type transcriptional regulator CdhR
KO
K13633
AraC family transcriptional regulator, transcriptional activator FtrA
Organism
skh
Shewanella khirikhana
Brite
KEGG Orthology (KO) [BR:
skh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
skh03000
]
STH12_00311 (cdhR_1)
Transcription factors [BR:
skh03000
]
Prokaryotic type
Helix-turn-helix
AraC family
STH12_00311 (cdhR_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
DJ-1_PfpI
Motif
Other DBs
NCBI-ProteinID:
AZQ09463
LinkDB
All DBs
Position
372366..373370
Genome browser
AA seq
334 aa
AA seq
DB search
MRSGVVKVDSAAGHQLLILVPPQVSLFELGCAAELFALPRPELHHWYQTRFMRWQDEDGL
AGDAGSSPVPATGGLGLSVQSGNRFDGVDILVVPSWPVDVAPPPSLLMAIRRFFEGGGRL
ISFCSGAFLLAEAGVLDGKVASTHWRYGAAFRERFANVTVQDEVLYTFDGRIGCSAGSAA
ALDLGLALIRHDFGREVANQVARRLVLSPHRSGGQAQFVQTPMPSRPDAFAATLDWALSR
LDNAISVEELAAKSHMSRRSFDRRFRLATGTSPKLWLLQHRLDRAKRLLEETNLGLDAVA
AQAGLGQALNLRLHFQKQLGITPSQYRRQFSRCV
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgcgttctggcgttgtaaaagttgattcagctgctggccatcagctgctgatcctggtg
ccgccgcaggtgtcgctgttcgagcttggctgcgccgccgagctgtttgcgctgccaagg
cccgaactgcaccactggtatcaaacacgctttatgcgttggcaggatgaagacggcctt
gcaggcgatgctggcagctcgccggtgcccgccaccggcggccttgggctaagcgtccaa
agcggtaatcgcttcgatggggtcgatatcctggtggtgccgagctggcctgtggatgtg
gcgccgcccccatcgctgctgatggccatacggcgcttttttgagggcggtggcaggctg
atttcattttgctccggcgcctttttgctggccgaagctggggtgcttgatggcaaagtc
gccagcacccattggcgctatggcgcagctttcagggaaaggtttgccaatgtaactgtg
caggatgaggtgctttacaccttcgatggccgtatcggctgctcggccggcagcgcggcg
gcattggacttggggctggcattgatccgccacgactttggccgtgaggtggccaatcag
gtagccaggcggctggtgctgtcgccccaccgcagtggcggtcaggcgcagtttgtgcaa
accccgatgccaagtcgccccgatgcgtttgccgctaccctggactgggcgttatcaagg
ctcgataacgccatcagtgtggaagagttggcggcaaagagccatatgtcgcgccgcagt
tttgaccggcgcttcaggcttgccacaggtaccagccccaagctgtggctgttgcagcac
cggctggatagggccaaacggctgttggaagaaaccaatctggggctggatgccgtggca
gctcaagcggggcttggtcaggcgctgaatttacggctgcattttcaaaagcagctgggc
attacgcccagccagtatcggcgccagttttcccgctgtgtatag
DBGET
integrated database retrieval system