Shewanella khirikhana: STH12_00400
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Entry
STH12_00400 CDS
T06711
Symbol
nhaR
Name
(GenBank) Transcriptional activator protein NhaR
KO
K03717
LysR family transcriptional regulator, transcriptional activator of nhaA
Organism
skh
Shewanella khirikhana
Brite
KEGG Orthology (KO) [BR:
skh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
skh03000
]
STH12_00400 (nhaR)
Transcription factors [BR:
skh03000
]
Prokaryotic type
Helix-turn-helix
LysR family
STH12_00400 (nhaR)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_30
MarR
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
AZQ09551
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All DBs
Position
470247..471155
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AA seq
302 aa
AA seq
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MQHLNYNHLYYFWMVQSKGSVAKAAEALCLTPQTVTGQIRALEDRLGGALFKRVGRQLEP
TDLGELVYRYADKMFNLSYELLDILNYRKDAAMLFEVGIADALSKALSSRVLLSVLPTDG
TMRLACYEATHESLMTRLREHKLDMILSDCAGESLKYPEILSKKLGECGVSFFSAREYSK
PFPACLEQDKLLIPGKRTSLGQQLHRWFAEKNLTVSILGEFDDAAMMKAFGFFGQGIFVA
PSIYRQDILGHGMQLLGETLDVREEYHVMFAERMIQHPAVKRLLETDFIDLFGGLDSQVQ
KF
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgcagcacctcaactataaccatctgtattacttctggatggtgcaaagcaagggctcg
gtggccaaggccgccgaagccctgtgcctgaccccgcaaacggtaaccggccagataaga
gcgctggaagatcgtctggggggcgcgcttttcaaacgggttggtcgccagctggagccc
acggatctgggtgagctggtgtaccgctacgccgacaagatgttcaacctaagctatgag
cttctggatatcctcaattaccgcaaagatgccgctatgctgtttgaggtgggcattgcc
gatgcgctgtccaaggcgctctccagccgggtactgttaagtgtgctgcctaccgacggc
accatgcgtctggcctgttatgaagcgacccacgagagcctgatgacgcgcctgcgggag
cacaagttggatatgattttgtctgattgtgccggtgagtcgctcaaatacccggaaatc
ctctccaaaaagctcggtgaatgtggcgtgagcttcttctccgcccgtgagtacagcaag
ccctttcccgcctgtcttgagcaggacaagcttttgatccccggcaagcgcaccagcctt
ggccagcagctgcatcgctggtttgccgaaaaaaacctgaccgtgagtattctcggtgaa
ttcgatgatgcggccatgatgaaagcctttggcttttttgggcaagggatttttgtggcg
ccgtccatctaccggcaggacatccttggccatggtatgcagttactgggggaaaccctg
gatgtgcgcgaggaataccacgtgatgtttgccgaacggatgatccagcatccggcggtt
aagcggttgctggaaaccgattttatcgatctgttcggcggcctcgacagtcaggtgcaa
aagttctga
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