Shewanella khirikhana: STH12_00473
Help
Entry
STH12_00473 CDS
T06711
Symbol
chb_1
Name
(GenBank) N,N'-diacetylchitobiase precursor
KO
K12373
hexosaminidase [EC:
3.2.1.52
]
Organism
skh
Shewanella khirikhana
Pathway
skh00511
Other glycan degradation
skh00520
Amino sugar and nucleotide sugar metabolism
skh00600
Sphingolipid metabolism
skh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
skh00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
STH12_00473 (chb_1)
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
STH12_00473 (chb_1)
00511 Other glycan degradation
STH12_00473 (chb_1)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
STH12_00473 (chb_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
skh03110
]
STH12_00473 (chb_1)
Enzymes [BR:
skh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.52 beta-N-acetylhexosaminidase
STH12_00473 (chb_1)
Chaperones and folding catalysts [BR:
skh03110
]
Intramolecular chaperones
Others
STH12_00473 (chb_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_20
CHB_HEX
CHB_HEX_C
Glyco_hydro_20b
Motif
Other DBs
NCBI-ProteinID:
AZQ09624
LinkDB
All DBs
Position
547955..550609
Genome browser
AA seq
884 aa
AA seq
DB search
MKFSLAASAILLALGVSGCSQAPVELAAVAAEPSVLSQASLQAFADGLDVKYRVITNRPD
EQCKKDAGEGRCFQAEIVLTSPIDFDGRDFEIYYSQMRPVQSVQSTDFVIEHVKGDLHRI
KPTEHFGGFKANQSQTLAFRGELWQLSETDAMPNYYITAPGLKPVVIASTRLAVEAETGL
ELRPYVEAFTDADKQYRRTDNDKLPWATAPVLFGANQSLVADPAAAAQRIVPAPLSQTLE
ADLGTLDLSGGIAVELPQGLDKAAIDAALARLARLGIEEAANGAKLKLVSDDSLGAEAYK
LLIRPEGAEIKAATNAGFAYGLSSLAALVQPGKSVISAQTITDEPRYGFRGMHVDVSRNF
HSKEFMLSLLDQMAAYKLNKLHLHMGDDEGWRLEIDGLPELTEIGSKRCHDLAEDTCLLP
QLGSGPDADVKVNGFYSKADYIEILKYASARQIQVIPSMDMPGHSRAAVKAMEARYRRLA
EVGDIKGAEEYRLIDPEDKTVYSSIQYYDDNTLNVCIESTYHFVDKVIDEIAKLHKEAGQ
PLTRYHIGADETAGAWLESPKCEAFIANNDEGVTDKSELGAYFIERVAKMLHDKGIEPAG
WSDGMSHTRPEKMPAMNQSNIWDVVAHKGHQRAHKQANLGWEVVLSNPEVLYFDFPYEAD
PKEHGYYWASRATNSQKVFGFMPGNLPANAEQWLDIENNPFAADDTKQLDEAGKVISEPM
QPGKAFYGVQGQLWSETIRSDEQAQYMIFPRLLMLAERAWHKPGWEVPYNHEGALYNQSS
GTFSAEARALQAADWQQMANTLGHKELAKLDLAGVHYRVPTVGARIEDGKLSANIAFPGL
GIEYREAGGNWQPYQGQVAVTKLPVEVRGVAADGTRKGRTLEVK
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atgaaattttccttagccgcatctgcgattcttctcgccctcggtgtcagtgggtgctca
caagccccggtcgagctcgctgccgttgccgccgagccttcggtgcttagtcaggccagt
ttgcaggccttcgccgatgggctggacgtgaaatatcgggtgatcaccaacagacccgat
gaacagtgcaaaaaagacgcaggcgaaggccgctgctttcaggccgaaattgtgctgacg
tcgcccatcgacttcgacggccgcgattttgaaatctattacagccagatgcgcccggtg
cagtcggtgcaaagcacagactttgtgattgagcatgtaaaaggcgatttgcaccgcatc
aagccaaccgaacatttcggcggattcaaggccaaccagagtcagaccctggcgtttcgc
ggtgagctgtggcagctgtctgaaaccgatgccatgcccaattattacattaccgcgcca
ggacttaagcctgtggtaattgccagcaccaggctcgcggtagaagccgaaaccggcctt
gagctgcgcccctacgttgaagcctttaccgatgccgacaagcagtatcgtcgtaccgac
aatgacaaactgccgtgggcaacggcgccagtgctgttcggggccaatcagtcgcttgtt
gctgaccctgccgcagcggcacagcgcatagtgcctgcgcctttgtcgcaaaccttggaa
gcggaccttggtacgctggacttgtcaggcggtattgccgttgaactgccacagggattg
gataaagccgccatcgatgctgcgctggcacgtcttgcccgcctcggtattgaggaggct
gcgaacggtgccaagctcaagctggtaagtgatgactcacttggtgcagaagcttataag
ctccttattcgcccagagggcgccgagattaaagccgccaccaatgccggctttgcctat
ggtctgtcgtcactggcagcgcttgtgcagccaggcaagtcggttatcagcgctcaaacc
atcacagatgaaccaagatacggctttcgcggcatgcacgtggatgtgtcccgtaacttc
cactccaaagagtttatgctgagcctgcttgaccagatggcggcctataagctcaacaag
ttgcacctgcacatgggtgatgatgagggctggcgcctcgagattgacggcctgccggag
ctgactgagattggcagcaaacgttgtcacgaccttgctgaagacacctgtctgttgccg
cagcttggcagtggtccggatgccgatgtgaaggtcaatggtttctacagcaaggctgac
tatattgagatcctgaaatacgcctccgccagacaaattcaggtgatcccgtcgatggac
atgcccggccacagccgcgctgccgtcaaagccatggaagccaggtatcgtcgtctcgcc
gaggtgggcgatatcaagggcgctgaagaatatcgccttatcgacccggaagataagacg
gtttacagctctattcagtactacgacgacaacaccctcaacgtgtgtattgagtcgacg
taccactttgttgacaaggtgattgatgaaattgccaagctccacaaagaagccggtcaa
ccgctgacccgttatcacattggcgccgatgaaaccgccggtgcctggcttgagtcgccc
aagtgtgaggcctttattgccaataacgacgagggcgtgaccgacaagagtgagctgggt
gcttactttatcgagcgggtggccaaaatgctccacgacaagggcattgaacccgctggt
tggagtgatggcatgagccacacccgcccggaaaaaatgcctgccatgaaccagagcaac
atctgggatgtggtcgctcacaaaggtcatcagcgtgcccacaagcaggctaaccttggc
tgggaagtcgtactgtctaaccctgaggtgctgtatttcgatttcccatacgaggccgat
ccgaaggagcatggctactactgggcgagccgcgccaccaacagccagaaggttttcggc
tttatgccgggtaacctgccggccaatgcggagcaatggctggatatcgagaacaacccc
ttcgcagctgacgatacaaagcagctggatgaggcgggcaaggttatcagcgagcctatg
cagcctggtaaggccttctatggcgtgcagggccagctgtggagcgaaaccattcgcagt
gacgagcaggcccagtacatgattttcccccgcctgctgatgctggcggagcgtgcctgg
cacaagccgggttgggaagtaccctacaaccacgaaggcgcgctctataaccagagcagt
ggcactttcagcgccgaagcccgtgcgctgcaggccgccgattggcagcagatggccaac
acccttggtcataaagagctggccaagctggatttggccggtgtgcactaccgtgtaccc
acagttggcgcccggattgaagatggcaagctgtcggccaatatcgccttcccgggcctg
ggtattgaataccgcgaggccggtggtaattggcagccttatcagggacaggttgcggta
accaagttgccggttgaagtgcgtggtgtggcggcagatggtactcgcaagggtcgtacc
ctcgaagtgaagtaa
DBGET
integrated database retrieval system
