Shewanella khirikhana: STH12_00508
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Entry
STH12_00508 CDS
T06711
Symbol
deoA
Name
(GenBank) Thymidine phosphorylase
KO
K00758
thymidine phosphorylase [EC:
2.4.2.4
]
Organism
skh
Shewanella khirikhana
Pathway
skh00240
Pyrimidine metabolism
skh01100
Metabolic pathways
skh01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
skh00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
STH12_00508 (deoA)
Enzymes [BR:
skh01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.4 thymidine phosphorylase
STH12_00508 (deoA)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_3
PYNP_C
Glycos_trans_3N
DUF7204
Motif
Other DBs
NCBI-ProteinID:
AZQ09655
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Position
584859..586190
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AA seq
443 aa
AA seq
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MFLAQEIIRKKRNGDALSKEEIQFFVKGITDGSVSEGQIAALGMAVYFNDMTMDERIALT
TSMRDSGTVLNWDSLGLNGPVIDKHSTGGVGDVISLMLGPMAAACGGYVPMISGRGLGHT
GGTLDKFDAIPGYQTEPSSELFRKVVKEAGVAIIGQTGDLVPADKRFYSIRDNTATVESI
SLITASILSKKLAAGLDALAMDVKVGSGAFMPTYEASLELARSITAVANGAGTKTTALLT
DMNQVLASCAGNALEVKEAVDFLTGKYRNPRLYEVTMGLCAEMLVLGGLAANEAEARAKL
NAVLDNGRAAEIFGKMVSGLGGPADFVESYDKYLPQAAIVRPVYAEREGFAYSMVTRELG
LAVVTLGGGRRKPGDALDYSVGLSNVCALGQAIDKATPLAVIHAQSEDAFEEAARAVRSA
IEIADKQPEKTPEIYQYVRAEDL
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgtttctggcacaagagattattcgcaaaaaacgcaacggtgatgccctcagcaaggaa
gaaattcaattcttcgtgaaagggattaccgatggcagcgtatccgaaggacagattgcc
gcgctgggtatggcggtgtatttcaatgatatgaccatggacgagcgcattgcgctgacc
acgtccatgcgtgattccggcacagtgctcaactgggacagccttggcctcaatggcccg
gttatcgacaagcacagcaccggcggtgttggcgatgtgatttcgctgatgcttggcccc
atggcggccgcctgtggcggttatgtacctatgatttcaggccgaggtctgggtcatacc
ggtggcaccctggataagtttgatgccattccaggctaccaaactgagccttcaagcgag
ctgttccgtaaggtcgtgaaagaagctggcgtggccattattggtcaaaccggcgatctg
gtacctgccgacaagcgcttctattcgattcgtgacaacactgccactgtcgagtccatc
tctcttatcactgcatcgattctgtcgaagaaattggccgcaggcctggatgcgctggcg
atggacgtgaaagtgggcagcggcgcctttatgccgacctatgaagcctcactggaactg
gcccgctctattaccgccgttgccaatggcgccggcaccaagaccactgcactgctcacc
gacatgaatcaggtgctggcttcctgcgccggtaatgcgctggaagtgaaagaagcggtc
gactttttgaccggcaagtaccgtaacccaagactctatgaagtcaccatgggcctgtgc
gccgagatgctggtgctcggtggtctggctgccaatgaagccgaggcccgcgccaagctc
aatgcggtactggataacggccgcgccgccgagatcttcggcaagatggtgtctggtctg
ggtggtcctgccgactttgtggaaagctacgacaagtatctgccgcaggcggcaatagta
cgcccggtttatgcagaacgtgaaggctttgcctatagtatggtgacccgtgaactgggc
ctcgccgtagtgactctgggcggcggtcgtcgcaagcctggtgatgcgctggattacagc
gtgggcttgtccaatgtgtgtgcattgggccaggccatcgacaaggcgacaccgctggcc
gtaattcatgctcagtcggaagatgccttcgaagaagcggctcgtgccgttcgaagcgct
atcgagattgccgacaagcaacccgagaaaacacctgagatctatcagtacgtacgcgct
gaagatctgtaa
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