Shewanella khirikhana: STH12_00515
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Entry
STH12_00515 CDS
T06711
Name
(GenBank) hypothetical protein
KO
K04485
DNA repair protein RadA/Sms
Organism
skh
Shewanella khirikhana
Brite
KEGG Orthology (KO) [BR:
skh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
skh03400
]
STH12_00515
DNA repair and recombination proteins [BR:
skh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
STH12_00515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
Lon_C
DnaB_C
AAA_22
Rad51
GvpD_P-loop
SLFN-g3_helicase
ABC_tran
AAA_16
Viral_helicase1
zf-LYAR
KdpD
RecA
AAA_29
cobW
NTPase_1
AAA
AAA_14
Zeta_toxin
DUF6549
nSTAND3
AAA_24
AAA_33
zf-UBR
Motif
Other DBs
NCBI-ProteinID:
AZQ09662
LinkDB
All DBs
Position
593673..595037
Genome browser
AA seq
454 aa
AA seq
DB search
MAKNKTAYVCNECGQDFPRWQGQCSACMEWNTITEVRLGAATPARGGRFSGYAGAGASEV
KTLDQIDLNELPRIPSSFKEFDRVLGGGIVPGSAILIGGHPGAGKSTLLLQTLCQLAEVM
PALYVTGEESLQQVAMRAHRLGLPTSKLKMLSETSVETLCDIALKEQPKLMVVDSIQVMH
MSDVQSSPGSVAQVRESASFLTRFAKQHGIAVIMVGHVTKDGSLAGPKVLEHCIDCSVMF
EGDSDSRYRTLRSHKNRFGAINELGVFAMTERGLKEVANPSAIFLSRGEEASSGSLVMVV
WEGTRPLLVELQVLVDNSALSNPRRVAVGMDANRLAMLLAVMHRHGGLQMSDQDVFVNVV
GGVKVSETSADLTLLLAMVSSFRGEVLARDLVVFGEVGLSGEIRPVPNGQERLIEAAKHG
FRRAIVPRANVPKKPPEGMEIIGVGKLTEALAAL
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagaataaaaccgcatatgtgtgtaacgagtgtggccaggacttccctcgctgg
caggggcagtgcagcgcctgcatggagtggaacaccattaccgaggtgcgtctgggggct
gcaaccccggcccgtggcggccgtttcagcggttacgccggtgccggggcatccgaggta
aaaacgctggatcagattgatctcaatgagttgccgcggatcccgagctcttttaaagaa
tttgatcgggtacttggcggcggcatagtgcccggcagcgccattctgattggcggccat
ccgggggcgggtaagagtacgctgctgttgcagaccctgtgtcagttggcggaagtcatg
cccgcgctctatgtcacaggtgaagaatccttgcagcaggtggccatgcgcgcccatcgg
ctggggctaccgacctcgaagctgaaaatgctctcggaaaccagcgtcgaaaccctttgc
gatatcgcccttaaagaacaacccaaattgatggtggtggactcgattcaggtgatgcac
atgagtgatgtgcaatcatctccgggcagtgtggcccaggtgcgcgagtcggcatcgttt
cttacccgttttgccaaacagcacggcattgcggtgatcatggttggccacgtgaccaaa
gatggcagcctggcaggccctaaggtgcttgagcactgcatcgactgctcggtgatgttt
gaaggcgactccgacagccgctaccgcaccctgcgctcccataaaaatcgcttcggtgcc
attaacgagcttggggtgtttgctatgaccgagcgggggcttaaagaagtagctaaccca
tcggccattttcctctcccgcggcgaagaagcgtccagcggctcgctggtgatggtggtc
tgggaaggtacccggccgctactggtggaattacaggtgctggtggacaactcggccctg
tccaacccccgcagggttgccgtggggatggatgccaaccgtctggccatgttactggcg
gtcatgcatcgtcatggcggcctgcagatgtcggatcaggacgtattcgtaaacgtggtg
ggcggggtgaaggtttcggaaaccagtgccgacctgaccttgctgctggcgatggtgtcg
agttttcgcggtgaagtgctggcgcgggatctggtggtatttggcgaagtgggtctgtcc
ggtgaaatccgccccgtgcccaatgggcaggaacgcttgattgaggcggccaagcacggt
tttcgccgtgccatagtgcccagagccaatgtgccgaaaaagccgcccgaaggcatggaa
attatcggtgtgggcaagcttactgaggcgctggcagcgctgtaa
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