Shewanella khirikhana: STH12_00559
Help
Entry
STH12_00559 CDS
T06711
Symbol
ribBA
Name
(GenBank) Riboflavin biosynthesis protein RibBA
KO
K14652
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:
4.1.99.12
3.5.4.25
]
Organism
skh
Shewanella khirikhana
Pathway
skh00740
Riboflavin metabolism
skh00790
Folate biosynthesis
skh01100
Metabolic pathways
skh01110
Biosynthesis of secondary metabolites
skh01240
Biosynthesis of cofactors
Module
skh_M00125
Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:
skh00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00740 Riboflavin metabolism
STH12_00559 (ribBA)
00790 Folate biosynthesis
STH12_00559 (ribBA)
Enzymes [BR:
skh01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.25 GTP cyclohydrolase II
STH12_00559 (ribBA)
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.12 3,4-dihydroxy-2-butanone-4-phosphate synthase
STH12_00559 (ribBA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHBP_synthase
GTP_cyclohydro2
Motif
Other DBs
NCBI-ProteinID:
AZQ09706
LinkDB
All DBs
Position
649290..650396
Genome browser
AA seq
368 aa
AA seq
DB search
MALHSIEEIIEDIRQGKMVILMDDEDRENEGDLIMAAELVTPEAINFMATYGRGLICQTM
TRARCQQLNLPLMVSNNNAQFTTNFTVSIEAAKGVTTGISAHDRAVTIQAAVAKDAKAAD
LVQPGHIFPLMAQEGGVLTRAGHTEAGCDLARLAGLEPSGVIVEILNEDGTMARRPDLEK
FSEKHGIKIGTIADLIEYRNNTETTVVREASCKLPTRFGEFVMHTFRDTIDNQLHYALVK
GEVDDNVLVRVHLTNTFNDILHSERDQERSWPLEKAMARIGSEGGVLVILGNREHDSDIL
AKVKAFEAEDKGEAAAPAKWVGTSRRVGVGSQILSSLGVHKMRLLSSPKKYHSLSGFGLE
VTEYVAGE
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atggcgctacacagtatcgaagaaatcatcgaagacattcgtcagggcaaaatggtgatc
ctgatggacgatgaagacagggaaaacgaaggcgacctgattatggccgccgaactggtg
accccggaagctatcaactttatggccacctatggccgtggcctgatttgtcagaccatg
acccgtgcccgttgccagcagctgaatctgccgctgatggtgagcaacaacaacgcccag
tttaccaccaactttaccgtatccatcgaggccgccaagggcgtgaccacagggatcagc
gcccatgaccgcgccgtaaccatccaggccgccgtggccaaagatgccaaggccgctgat
ttggtgcagcctggccacatcttccccttgatggcccaggaaggcggcgtgctgacccgc
gcaggccacaccgaagcgggctgcgacttggcacgcttggccggtcttgagccctccggc
gtaattgttgaaatcctcaatgaagacggcaccatggcccgtcgtccggatctggaaaag
ttctccgaaaaacacggtatcaagattggcaccattgccgacctgattgagtaccgcaac
aacacagaaaccacagtcgtacgtgaagcaagctgcaaactgccgacccgttttggtgag
tttgtgatgcataccttccgcgacaccatcgacaatcagctgcactatgcgctggttaaa
ggtgaggtggatgataatgtgctggtgcgggtgcacctgaccaacaccttcaacgatatc
ctgcattcagagcgggatcaggaacgctcctggccgctcgagaaagccatggcccgtatc
ggtagcgaaggtggcgtgctggttatcctcggtaaccgcgagcacgacagtgacatcctg
gccaaggtgaaagcctttgaagccgaagacaaaggtgaagcagccgccccggccaagtgg
gttggtacttcccgtcgtgtgggtgtgggctcgcagattttgtcgtccctcggggtgcac
aagatgcgtcttttaagctctcccaagaagtaccattcactgtcgggctttggccttgaa
gtgactgagtacgtcgccggcgagtga
DBGET
integrated database retrieval system
