Shewanella khirikhana: STH12_00564
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Entry
STH12_00564 CDS
T06711
Symbol
ipdC
Name
(GenBank) Indole-3-pyruvate decarboxylase
KO
K04103
indolepyruvate decarboxylase [EC:
4.1.1.74
]
Organism
skh
Shewanella khirikhana
Pathway
skh00380
Tryptophan metabolism
skh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
skh00001
]
09100 Metabolism
09105 Amino acid metabolism
00380 Tryptophan metabolism
STH12_00564 (ipdC)
Enzymes [BR:
skh01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.74 indolepyruvate decarboxylase
STH12_00564 (ipdC)
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GFIT
Motif
Pfam:
TPP_enzyme_N
TPP_enzyme_M
TPP_enzyme_C
Motif
Other DBs
NCBI-ProteinID:
AZQ09711
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All DBs
Position
complement(653135..654961)
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AA seq
608 aa
AA seq
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MDAISQNLGNAYRAQLPTLGQSLCEVLTFFGLERIYGVGGDFVANLINALDPSISVQPSS
NEMHAGFSACAQAELTGLGACLTTYTVGSLPCVSAAALARTEGLPVIFLSGAPGEGEIHG
QALHHMVHPACGWHTDVNAALNAFKALGIRAERLQGQRHQGQPNVAAARFFELVSDAVQT
RQPVYIEVPRDLVNMPTQTLRLPSSLQALSAYTRLGLEGSELIASDITERLIRARAPLLY
LGERLRMNPALLTRVVAFCQRLGLPYATSWFAKGMVDESHPLCLGAYNGVFSACRGQEYI
DRHADYVLELGTAIYDSDTNNAFASGTHAIDMHPNKTVLKGTARSELDLLAVIDELERAK
LPVRNLGLAGLLPPAELTEESSPGEARLSYANLADTINYFQRSAGQDLILVPEVGNALFA
AFALEARSSDLGRSFLANPWYAAMGTSLPYARAIADELAVKNSRQPILLITGDGGFNFQC
NELINLQKQRANLIILYMRNNLFHLGKAGDAPIYHCNDENFSPASLIAAYGGHYHQCDSS
GRLVDLLHTCCLGGLHLIEIPTATCNESLSPIAVKLNTYIGFKNGAPDAVAAWHSLCGKS
EVAVASEV
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atggacgccatcagtcaaaatctcggtaacgcctaccgtgcgcagttacccaccctgggg
caaagcctgtgtgaagtgctgacatttttcggactcgaacgcatctacggtgtcggcggc
gactttgttgccaaccttatcaatgcgctggacccaagcatcagcgtgcagccttcgagc
aatgaaatgcacgcgggttttagcgcctgtgcccaggccgagttaaccggccttggcgcc
tgcctgaccacctacaccgtcggcagcctgccttgtgtgtcggcagcagcccttgcccgc
accgaaggcctgccggtgatttttctgtccggtgcaccaggagaaggcgaaatccacggt
caggcactgcatcatatggtgcatcccgcctgtggctggcataccgatgttaatgccgcg
ctcaatgcatttaaggcgcttgggatcagagccgagcggcttcagggacagcgtcatcag
gggcaacccaatgtggccgcagcacgcttttttgagctggtaagtgatgccgtgcaaacc
cgtcagccggtatatattgaagtgccacgggatctggtgaatatgcctacccaaacactc
aggcttccctcctccctgcaagcgctcagcgcatatacccgtcttggtctggaaggctct
gagcttattgcaagcgacatcaccgagcggctaattcgagcccgtgcgcctttgctttac
ctgggtgagcggctcagaatgaaccctgcactactgacccgggtggtggccttttgccag
cgattggggctgccttacgccaccagttggttcgctaagggcatggtagatgaatcccat
cccctgtgccttggcgcctacaatggcgtattcagcgcctgccgcgggcaggaatacata
gaccgccacgcagactatgtattggagcttggcaccgcgatttatgactcagataccaac
aatgcctttgccagtggcacccacgccatagacatgcaccccaataaaactgtgcttaaa
ggcacggctcgcagtgaactggatttattggcggtaatcgatgagctggaacgagcgaaa
cttccagtgcgaaatcttgggctggcaggattgttgccaccagccgagcttactgaagaa
agcagccctggagaagcaaggctcagttacgccaacctcgcagacaccatcaactatttt
cagcgcagcgccggccaggacctgattttggtgcctgaagtgggcaatgccctttttgcc
gcctttgcccttgaagccagaagctcagatctgggcagaagctttcttgccaatccctgg
tacgccgccatgggcaccagcctgccctacgcacgggccattgccgatgaacttgccgtt
aaaaacagtcgtcaacctattctgctcatcaccggtgacggcggctttaactttcagtgt
aatgagctgataaaccttcaaaaacagcgcgcaaacctcatcattctctacatgcgcaat
aacctgtttcatttgggtaaagcaggcgatgcccccatctatcactgcaacgatgaaaac
ttcagtccagcgagtttgatagcagcctatggcggacattatcaccagtgcgacagcagc
ggccgactggtcgatttgctgcacacctgctgccttggcggactgcatctgatagaaatc
ccgaccgccacctgcaacgaaagcctaagccccatcgccgtgaagttgaacacctacata
gggtttaagaatggtgcgccagacgccgttgccgcctggcattcactctgtggcaaatct
gaggtcgcagtcgcgagtgaggtgtga
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