Shewanella khirikhana: STH12_00599
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Entry
STH12_00599 CDS
T06711
Name
(GenBank) Methylmalonyl-CoA carboxyltransferase 5S subunit
KO
K01571
oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:
7.2.4.2
]
Organism
skh
Shewanella khirikhana
Pathway
skh00620
Pyruvate metabolism
skh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
skh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
STH12_00599
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
skh02000
]
STH12_00599
Enzymes [BR:
skh01000
]
7. Translocases
7.2 Catalysing the translocation of inorganic cations
7.2.4 Linked to decarboxylation
7.2.4.2 oxaloacetate decarboxylase (Na+ extruding)
STH12_00599
Transporters [BR:
skh02000
]
Other transporters
Primary active transporters [TC:
3
]
STH12_00599
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PYC_OADA
HMGL-like
Biotin_lipoyl
Biotin_lipoyl_2
HlyD_D23
PTS_EIIA_1
YqfD
DUF4384
Motif
Other DBs
NCBI-ProteinID:
AZQ09738
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Position
687434..689233
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AA seq
599 aa
AA seq
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MTKALALTDVVLRDAHQSLLATRLRIEDMLPIAAKLDQVGYWSLETWGGATFDACIRYLG
EDPWERLRLLKQAMPNTPMQMLLRGQNLLGYRHYADDLVHRFVERAHDNGMDVFRVFDAM
NDVRNLQEAVRAVKQVGAHAQGTISYTTSPVHNLDTWVDMAKRLEDLGCDSLCIKDMAGL
LRPMEAFELVSRLKSQTGLMVAMHSHATTGLSTATYQKAIEAGIDVLDTAISSMSQTYGH
SATETLVAMVEDTERSTGLDMALLEEIAAYFREVRKKYAKFEGALQGIDSRILRAQVPGG
MLTNMESQLKEQGASDKLDLVLDEIPRVREDLGFLPLVTPTSQIVGTQAVINVLTGERYK
SLTKETEGVLKGEYGATPAPVNAELQQRVLKGAEPVTCRPADLLTPEMERLRSELAQKAA
ADSIKLSEDLDDDVLTYALFPQIGLQFLKNRGNADAFEPAPVAVAQAVSAPARAASGPET
YTVKVDGQTYVVEVAAGGEISQIQPQGASQSSAAVTPAVAAAAPVSHEIKLEMSAPLSGN
IFKIHVSPGDTVKAGDVVIILEAMKMETEIRAQADGVIARLWVKEGDSVAVGAQLLSLA
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaagccttggcccttaccgatgtggtgctgcgcgatgcgcaccaatccctgcta
gctacccgtttacgaattgaagacatgttgcccatcgctgccaaattggatcaggtgggc
tattggtcactggagacctggggcggcgcgacgttcgatgcctgtatccgctatttgggg
gaggacccctgggagcggctgcgactgctcaagcaagccatgcccaacaccccgatgcag
atgttgctgcgcgggcagaatctgctgggttatcgccactatgccgacgatctggtgcac
agattcgtagagcgcgcccacgacaacggcatggacgtgtttcgggtattcgatgccatg
aacgatgtgcgtaacctgcaagaggcggtgcgcgccgtgaagcaggtgggtgcccatgcc
cagggcaccatctcctacactaccagcccggtacataacctggacacctgggtggatatg
gccaagcgcctcgaagatctgggctgcgattcgctctgtatcaaagacatggccggtctg
ctgcgccccatggaagccttcgagctggtgagcaggcttaagtcgcaaaccgggctgatg
gtggccatgcacagccacgccaccaccgggctttcgaccgccacctatcaaaaggcgatt
gaggccggtattgatgtgctggataccgcgatttcttccatgagccagacctacggccac
agcgccaccgagaccctggttgccatggtggaagacactgagcgctcaaccggattggat
atggcgctgctggaagagattgccgcctatttccgcgaggtgcgtaaaaagtacgccaaa
ttcgaaggtgcgctgcagggcattgattcccgtattctgcgcgcccaggtgcctggtggc
atgctcaccaatatggagagccagctaaaagagcagggcgccagcgataaactcgatttg
gtgctcgatgaaatccccagagtgcgagaagacctgggcttcctgccgttggtgacaccg
acctctcagattgtgggtacccaggcggtgatcaacgtgctcaccggcgagcgctacaag
tcgctcaccaaggaaaccgagggggtgcttaagggcgagtacggtgccaccccggcgccg
gtgaacgccgagctgcagcagcgggtgcttaaaggtgccgagcccgttacctgtcgtccc
gccgatttgctgaccccagagatggagcggcttcgctccgaactggcgcaaaaggctgct
gccgacagcattaagctcagtgaagatctcgacgatgacgtgctcacctatgcgctgttt
ccgcagattgggctgcagttcctgaaaaaccgtggcaatgccgatgcctttgaacccgct
ccagtggcagtggctcaggccgtctctgcccctgccagggcagcctctgggccggaaacc
tatacggtgaaggtggatggtcaaacctatgtggttgaagttgccgctggcggtgaaatc
agtcaaatccagccacagggagcaagtcagtccagcgcagcagttaccccagccgtcgca
gcggctgcgcctgtaagccacgaaatcaaactggaaatgagcgcgcccctgtctgggaat
atcttcaaaattcacgtgtcgcctggcgatactgtgaaggctggggatgtggtgatcatt
ctcgaagccatgaagatggaaaccgaaatccgcgcccaggccgatggggttattgcccgt
ctgtgggtgaaagaaggcgactcggttgccgttggcgctcagctgttgtcgttggcctaa
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