Shewanella khirikhana: STH12_00745
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Entry
STH12_00745 CDS
T06711
Name
(GenBank) hypothetical protein
KO
K02674
type IV pilus assembly protein PilY1
Organism
skh
Shewanella khirikhana
Brite
KEGG Orthology (KO) [BR:
skh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
skh02044
]
STH12_00745
02035 Bacterial motility proteins [BR:
skh02035
]
STH12_00745
Secretion system [BR:
skh02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
STH12_00745
Bacterial motility proteins [BR:
skh02035
]
Pilus system
Pilus assembly proteins
STH12_00745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T4P_PilY1
Motif
Other DBs
NCBI-ProteinID:
AZQ09884
LinkDB
All DBs
Position
866803..870318
Genome browser
AA seq
1171 aa
AA seq
DB search
MSVSRNIVRALALLCIASLSAADDTSLFKVSTGNSRPQVLIILDTSSSMGATVQMPPVYV
PPTSRSGEPLPPAAGSKLYFIRGDEQLDVNNLQAASYILHANNACADSWEQLQKYGIYTG
FIGSFDPQLRQWSDTPASGGSVLVDCLADIESSNYQNGAGRAEGLPVASGSEAHIRVNAN
SSQAHRDAAKASARASGLRRGVAVTLYSEHYVNWKIDNPIPVYGTRMDLAKEALRQVALS
MVDIDLGLAIFNVNLGEREAPGGPYGHGGKIFSAINRFDSARRMTFLGQVERMGYAFQTP
TCETLYEAYRYFAGEPVLYGHQDRDYYWDYGAAYKGMSGDPAAEVQGVYQSPFKRCDRRG
YIIYITDGEPTEDFDANDAIRALTGVRYSHSDDNDWGKMQNASEALIALAGWMNTHDVNP
GVDGEQMVSTHTIGYSEGALGAKTLLESVATAGGGSFFDATDLSSQNNFQDKLQQALKAA
LNQIVERESSFSSPAVVNSETRLETGEHVYLPMFRSAQRPRWSGDIKKYRLSGDGRVLDK
NGVSVTGADGGVAAEACSVWASSCNGGDGQNFGRGGVAAAVAAMKNKDRVLYTQDGAKLE
PLTLDSLTNIAGGINELALQLGLPEVLVENHVSWIRGIDVDDADRDGDRTDSRSDSFGDM
LHARPVALEYGSGSDKAVYLLAATNQGFLHMFKDSGGSVFELWAFMPWSLLSNQYPLRTA
VSGGHNIYGLDSTPVVHRFNGVDGQKTWVFFGMRRGGKQYFALDISDPGNPTMLWQAGPD
SEGLEGLGQTWARPVVTRIPGHKGPVLIVGGGYQPGAKDSAQVGSSDSKGLGVYILDAAD
GSLIHSFSAEVVRENQTLMRGLKDSIPNEVAVLDANGDGLTDRVYATDTGGNVWRLDLPG
PKPDKIGAAWSAFKFASLGGDSAVSDRRFFSAPVVAQTATDLSFTLELDTTTGTETRVSR
RQLPYDAVAIGSGIRPLPMDTSREDAFFLLQDRITASQSFNKMLGGDEPPEPLTREDLFD
VSYRPISEQDEIAFAQTRGWVYGLGLPGEKSLSSATIVRGRVFFTTFAPEAGDENLCQAK
GRSFLYGMDLHRGFSFFTRQRLEMSSHLADTPQLVIPDGERMYFIGVGNADYDMRKAPCP
ANDPNCDPCKDGGPRCIGGGLETHKIYYYSQ
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtttccagaaatattgtccgcgccctggcgctcctgtgtatcgccagcttgagt
gctgcagacgatacgtcactgttcaaggtcagcacaggtaacagcagaccacaggtactg
ataattctggatacctcaagcagtatgggggcgacggttcagatgcccccggtctatgta
cctccaaccagccgcagtggcgagccgctgcctcctgcggcaggcagcaagctctacttt
atccgcggggatgagcagttggatgtcaataacctgcaggcggccagctatattttgcac
gccaacaacgcctgcgccgattcatgggagcagctgcaaaagtacgggatctacaccggc
tttatcggcagttttgacccgcaactgcgtcagtggtccgatacgccagccagtggtggg
agtgtattggtggactgtcttgccgacatcgaaagcagcaactatcaaaatggcgcagga
cgcgcagagggcttaccggtagcaagtggttctgaagcccatatccgcgtcaatgccaac
agttcccaggcccatcgtgatgccgccaaggccagtgccagagcgtctggacttcgccgt
ggcgtggcagtcaccctttacagcgagcactacgttaactggaaaatagacaaccccatt
ccggtttatggcaccagaatggatctcgccaaggaggcgctgcggcaggtggcgctttcc
atggtggatatcgatttggggctggcgatattcaacgtcaatctgggcgagcgtgaggca
cccggtggcccctacggccacggagggaaaattttctccgccattaacaggtttgacagc
gcgcggcggatgaccttccttgggcaggttgagcgcatgggctacgccttccaaacaccg
acctgtgaaaccttatacgaggcttaccgttattttgctggtgaacctgtgctttatggc
catcaggacagggactactactgggattacggtgccgcttacaaaggcatgtccggcgat
cctgccgccgaagttcaaggcgtatatcagtcgccttttaagcgctgtgatcgccgtggt
tacatcatctacatcaccgacggcgagcccaccgaagactttgacgccaacgatgccatc
cgcgctctgaccggcgtgagatacagccacagtgatgataatgactggggcaagatgcaa
aatgccagcgaggcattaattgcgctggcagggtggatgaacacccatgatgtaaacccc
ggtgttgatggcgagcagatggtgtctacccacaccattggctactccgagggggcgttg
ggcgccaaaaccctgttggagtcggtagccacggcaggtggcggcagtttcttcgatgcc
accgatcttagttcccaaaacaattttcaggataagctgcagcaggcgttgaaggcggcg
ctgaaccagatagtcgagcgggaatccagcttttcgtctccggcggtggttaacagtgaa
acccgacttgaaaccggtgagcacgtatatttacccatgttccgttcagcccagcgcccc
cgttggagcggtgatatcaagaagtatcgcctcagtggcgatggcagggtgctggataaa
aatggggtctctgtcaccggggcggatggtggggtggcagccgaggcctgctctgtgtgg
gctagctcctgcaacgggggcgatggtcagaatttcggtcgtggcggtgttgccgctgca
gtcgctgcgatgaagaacaaagacagggtgctttacacccaggacggagccaagctggag
cctttgactctggatagccttaccaatattgccggtggcattaacgagctggcgttgcag
cttggattgcctgaggtgctggtcgaaaaccatgtgtcctggatccgtggcatcgatgtc
gatgatgccgacagggatggcgaccgcacagacagccgcagcgatagtttcggcgacatg
ctccatgccaggccggtcgcgctggaatacggtagcgggagtgacaaagccgtttacctg
ctggccgccaccaatcagggttttctgcacatgttcaaagactctggtggttctgtgttt
gagctgtgggcctttatgccctggagtttgctgtcaaatcagtatcctctgagaacggct
gtcagcggcggtcacaatatttacggtctggactcgaccccggtcgtgcatcgctttaac
ggggttgacgggcaaaagacctgggtctttttcgggatgcgccgtggcggaaagcaatat
tttgcgctggatatttcagaccctggcaatcccaccatgttgtggcaggctggcccggac
agcgaggggctggaagggctggggcagacctgggccaggccggtcgtgactcgtatcccg
ggccataagggaccggtgctgatagtgggcggtggctatcagcccggagccaaagactca
gctcaagtcggcagcagtgacagcaaggggctgggggtgtatatcctcgatgcggccgat
ggcagcctgatccacagcttcagtgccgaagttgtccgtgagaaccagacgctgatgcgg
gggctgaaagacagtattcccaacgaagtggcggtgttggatgccaatggcgatggtctg
accgacagagtttatgccaccgacacaggggggaatgtctggcgtttggacttgcccggc
cctaagccggataagattggcgctgcatggtctgcattcaagtttgccagcctggggggc
gattcggccgtcagtgacagacgcttcttttctgcacccgttgttgcccagaccgcaaca
gacctcagttttaccctggagctggacacgacaacaggcaccgaaacccgggttagccgc
cgccaactgccttacgatgcagttgccataggctcggggatccggcccttacccatggat
accagccgcgaggatgccttcttcctgttgcaggatcgcattaccgccagtcagtcgttt
aacaaaatgctgggcggagatgagccgccagaacccctcacccgcgaggacctgtttgac
gtcagttatcggccaatatcggaacaagacgaaatagcctttgcccagacacgtggctgg
gtttatggcttgggcttgcccggtgaaaagagtctctccagcgccaccatagtccggggc
agggtgttcttcaccacgtttgcgcccgaggcgggagacgagaacctgtgccaggcaaag
gggcgcagctttctctatggcatggatttgcaccggggcttcagtttcttcacccgtcag
cggctggagatgagctcccatctggcagataccccccaactggtgatcccggatggtgag
cgcatgtatttcatcggtgtcggtaatgccgactacgacatgagaaaagccccttgtccg
gcgaacgaccctaattgcgacccctgtaaagacggcggtccccgctgtattggcggcggg
ctcgaaacccacaaaatctactactacagccaataa
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