Shewanella khirikhana: STH12_00780
Help
Entry
STH12_00780 CDS
T06711
Symbol
glnS
Name
(GenBank) Glutamine--tRNA ligase
KO
K01886
glutaminyl-tRNA synthetase [EC:
6.1.1.18
]
Organism
skh
Shewanella khirikhana
Pathway
skh00970
Aminoacyl-tRNA biosynthesis
skh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
skh00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
STH12_00780 (glnS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
skh01007
]
STH12_00780 (glnS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
skh03016
]
STH12_00780 (glnS)
Enzymes [BR:
skh01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.18 glutamine---tRNA ligase
STH12_00780 (glnS)
Amino acid related enzymes [BR:
skh01007
]
Aminoacyl-tRNA synthetase
Class I (A)
STH12_00780 (glnS)
Transfer RNA biogenesis [BR:
skh03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
STH12_00780 (glnS)
Prokaryotic type
Other AARSs
STH12_00780 (glnS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1c
tRNA-synt_1c_C
tRNA-synt_1c_C2
Motif
Other DBs
NCBI-ProteinID:
AZQ09919
LinkDB
All DBs
Position
921328..922995
Genome browser
AA seq
555 aa
AA seq
DB search
MSHVDNEVRPSNFIRNIIDEDLASGKHTSVHTRFPPEPNGYLHIGHAKSICLNFGIAEDY
KGQCNLRFDDTNPEKEDIDYVNSIQEDVKWLGFQWDGEVRYSSNYFDQLYGYAVELINKG
LAYVCFLNAEETREYRGTLKEPGRNSPYRDTSPEENLALFEKMRDGGFKEGECVLRAKID
MASPFMCMRDPVIYRVKFAHHHQTGDKWCIYPMYDFTHCISDALENITHSLCTLEFQDNR
RLYDWVLDNLNDFQAPNRTRQYEFSRLNLEYTLMSKRKLNDLVVRGLVSGWDDPRMPTIA
GLRRRGYTPASIREFCQRIGVTKQDNLVEVGMLEACIREDLNENAPRAMAVIRPIKVIIE
NFTAPELEYVKAPVHPNLEEMGERELAFGREIYIDAADFREEANKQYKRLVLGKEVRLRN
AYVIKAERCEKDAEGNVTTVYCTYDPETLGQNPSDGRKVKGVIHWVEATTALPAEFRLYD
RLFIDANPAAAETVDEVLNPGSLEVVHGFAEAPLANAKASQAYQFEREGYFCADSKDSAP
GKLVFNLTVPLRESF
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgagtcacgtggacaacgaagtacgtcccagtaacttcattcgcaatatcatagatgag
gatttggccagcggtaagcacaccagtgtgcacacgcgttttccgcctgagccaaacggc
tatctgcacattggtcacgccaagtctatctgtctgaacttcggtatcgcagaggactac
aagggccagtgcaacctgcgttttgatgataccaaccctgaaaaagaagacatcgactat
gttaattcgattcaggaagacgttaagtggctcggattccagtgggatggcgaggttcgc
tattcatccaactatttcgatcagctctacggctatgcagttgaattgatcaacaagggc
ctggcctatgtgtgtttcctcaatgccgaggaaacccgcgaataccgtggcaccctgaaa
gagccgggccgtaacagcccttaccgcgacacctcccccgaagaaaacctggcgctgttt
gaaaagatgcgcgacggtggcttcaaagagggtgagtgtgtgctgcgtgcaaaaatcgat
atggcgtcgccctttatgtgtatgcgcgaccctgtgatttaccgcgtgaagtttgcccat
caccaccagaccggtgacaagtggtgcatctatccgatgtacgactttacccactgtatc
tcggatgcgctcgaaaacatcacccattcactgtgtacgctggagttccaggacaaccgt
cgtctgtatgactgggtgctggataacctcaatgatttccaggcgcctaaccgtacccgt
cagtacgagttttcccgtctgaatcttgaatacaccctgatgtccaagcgcaagctgaac
gatctggtggtacgtggtttggtgtccggttgggacgacccacgtatgccaaccatcgcc
ggtctgcgtcgccgtggttacaccccggcctctatccgcgagttttgtcagcgcattggt
gtgaccaagcaggacaacctggtggaagtgggcatgctggaagcctgtattcgtgaagat
cttaacgaaaacgccccacgcgccatggcggttattcgccctattaaggtgatcatcgag
aacttcactgcacctgagcttgagtatgtgaaggcgcctgtgcaccccaacctcgaagag
atgggtgagcgtgagctggcgtttggccgtgagatctatatcgatgctgccgacttccgt
gaagaagccaacaagcaatacaagcgcctggtgctgggcaaggaagtgcgtctgcgtaat
gcctatgtaatcaaggctgagcgctgcgaaaaagatgccgaaggcaatgtcactactgtg
tactgcacctacgatcctgagaccctgggccaaaacccaagcgatggtcgcaaggtgaaa
ggtgtgatccactgggtagaagcaaccacagcgctgcctgccgagttccgcctctacgat
cgtctgttcatcgatgccaatccggctgccgctgaaaccgtggatgaagtgttgaacccg
ggttcgctggaagtggtgcacggctttgccgaagcgccgctggccaatgccaaggcttcg
caggcgtatcagttcgagcgagaaggctacttctgtgccgacagcaaagactccgcccca
ggcaagctggtgtttaacctgactgtgccactgcgcgaatcattctaa
DBGET
integrated database retrieval system
