Shewanella khirikhana: STH12_00874
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Entry
STH12_00874 CDS
T06711
Symbol
dusC_1
Name
(GenBank) tRNA-dihydrouridine synthase C
KO
K05541
tRNA-dihydrouridine synthase C [EC:1.-.-.-]
Organism
skh
Shewanella khirikhana
Brite
KEGG Orthology (KO) [BR:
skh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
skh03016
]
STH12_00874 (dusC_1)
Transfer RNA biogenesis [BR:
skh03016
]
Prokaryotic type
tRNA modification factors
Dihydorouridine synthases
STH12_00874 (dusC_1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Dus
FMN_dh
His_biosynth
BKACE
Oxidored_FMN
Motif
Other DBs
NCBI-ProteinID:
AZQ10010
LinkDB
All DBs
Position
complement(1020703..1021674)
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AA seq
323 aa
AA seq
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MIIGTTRLRIVLAPMEGVLDHLMRELLSSINPYDLLVTEFVRVVDQLLPEKVYYRLCPEL
KNGGLTKNGTPVRVQILGQEPGWMAENALRAVTLGSRGVDANFGCPAKMVNRSKGGAVLL
QYPELIHDIVKAMREAVPGEQPVTAKIRLGYEDKSLFMENALAVYEAGATELAIHARSKV
DGYKPPAYWEYITEVRERLPIPVIANGEIWSREDAERCMQVTGCDSIMIGRGALSLPNLA
ASIKGDAPFDWQRTLDLMIHYSELELDNQKATYYPARIKQWFSYLSRQYPEADTLFREIR
IHKTTDAILQALKDAAANLRQPG
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
ttgataattggaaccacccgcttgcgcatcgttcttgcccccatggagggcgtacttgac
catctgatgagagaactgctctcgtccatcaatccctatgacctgctggtcaccgaattt
gtgcgcgtggtggatcaactgctgccggagaaggtgtactaccgcctgtgccccgagctt
aaaaacggcggcctgaccaaaaacggcaccccggtgcgggtgcaaattctcggtcaggag
cccggctggatggcagaaaacgccctgcgcgctgtgaccctgggctcccgcggcgttgat
gccaatttcggctgcccggccaaaatggtaaaccgcagcaaaggcggcgctgtattgctg
caatatcctgagttgattcacgatattgttaaagctatgcgcgaggctgtgccaggcgag
caaccggttaccgccaaaatccgtcttggctacgaagacaaaagcctgtttatggaaaat
gcgctggcggtctatgaagccggtgccaccgagcttgccattcacgcccgcagcaaggtc
gatggctacaagccgcccgcctattgggaatacattaccgaggtgcgcgagcgtctgccg
atcccggtgattgccaatggcgagatctggagccgcgaagatgccgagcgctgtatgcaa
gtgaccggctgcgacagcatcatgataggtcgcggcgccttgtcgctgccgaaccttgcc
gccagcatcaaaggcgatgcaccttttgattggcaacggaccctggatttgatgatccat
tactccgagctggagctggataaccagaaggcgacctactatccagcccgcatcaaacag
tggttcagctatttaagccgtcagtaccccgaggccgataccctgttccgtgaaatccgc
attcacaaaaccacagatgccattctacaggccctcaaggacgctgccgccaacctgcgc
caacccggctga
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