Shewanella khirikhana: STH12_00907
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Entry
STH12_00907 CDS
T06711
Symbol
msbA_2
Name
(GenBank) Lipid A export ATP-binding/permease protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
skh
Shewanella khirikhana
Pathway
skh02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
skh00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
STH12_00907 (msbA_2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
skh02000
]
STH12_00907 (msbA_2)
Enzymes [BR:
skh01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
STH12_00907 (msbA_2)
Transporters [BR:
skh02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
STH12_00907 (msbA_2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
DEAD
APS_kinase
AAA_22
NTPase_1
AAA_29
ABC_ATPase
AAA_16
RsgA_GTPase
nSTAND3
AAA_15
NB-ARC
Sensor
Motif
Other DBs
NCBI-ProteinID:
AZQ10043
UniProt:
A0ABN5TTN0
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All DBs
Position
1063063..1064862
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AA seq
599 aa
AA seq
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MTTVHNQEVSAVFKRLLGYLKPMKGIAILSVLALLLYGAVDAAFIAFIQPFIDKGFSSGG
LSGSVDMGTSSGFDSNNQVMFWAPFVVVGLFTLRGLANFVSTYGISYMSAKLIMDMRQQV
FEHYLTLPVSYIDRENSGNLISRVTFDTEQVARASGTALISIVRDGVTVLFMLGLMFYSS
WKLSLCILIVGPIIGLVITVVSRRFRKISRQIQSAMGGVTAVTEQMIKGHKNVLAFGGQE
TEAERFARVNDQNRHQNMKLAVAQAISQPTIMIIGSFALAFVLYAASFDSLKSELTAGTF
ATVLAAMLAMLQPIKSLTRVNAEFQRGIAACTTVFELLDTKPEADNGTFETARAEGHVRF
DNVCFRYEGQETRALDGINFDVPPGKTLALVGRSGSGKSTIASLINRFYNGLEQGAIELD
GVNVEDYRLKNLRSQVALVSQQVTLFNDTIANNIAYACPWELTREQIVEAATLAHAMEFI
NKLPDGLDTQVGENGVLLSGGQRQRIAIARAMLRNAPVLILDEATSALDTESEKAIQEGL
ENLRQNRTSIVIAHRLSTIESADEILVIEQGQIVERGNHKSLLAQDGMYAKLYQMQFSA
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgactacagttcacaatcaggaagtctcggcggtttttaaacgtctgcttggctacctt
aagcccatgaagggcattgccatcctttcagtgctggcgcttctgctttatggtgcggtg
gatgcagcctttatcgcatttattcaaccctttatcgacaagggcttttcgtccggcggc
ctttctggctccgtggatatgggcacctcttccggatttgattccaataatcaggtgatg
ttctgggccccctttgtggtggttggcctgttcaccctgcgcggtctggccaactttgtg
tccacttacggtatttcctacatgagtgccaagctcattatggacatgcgccagcaggta
tttgagcattacctcaccctgcctgtgagttatatcgaccgtgaaaactccggcaacctt
atctcccgcgtcaccttcgacaccgagcaagtcgccagagcatctggcactgcgctgatc
tccattgtgcgcgacggggtgactgtgctgttcatgctgggattgatgttttacagctcg
tggaagttgtcgctgtgtattctgattgtcgggccgattatcgggcttgtgatcactgtg
gtcagtcgccgtttccgtaagatttcccgccaaattcaaagcgctatgggcggcgtgacg
gccgtaaccgagcagatgatcaagggccacaaaaacgtgctggcctttggcggtcaggag
accgaggccgaacgctttgcccgggtgaacgaccaaaaccgtcatcagaacatgaagctg
gccgtggcccaggctatcagccagcccaccatcatgatcattggctcattcgcactggcc
tttgtactctatgctgcaagtttcgattcgctcaagagtgagcttaccgccggtaccttt
gccactgtgctggcggccatgctggcaatgctgcagcctatcaagagcctgacccgggta
aacgccgagttccagcgcggtattgcggcctgtaccacggtatttgagcttttggacacc
aagcccgaggcggacaacggcacctttgaaaccgcccgcgccgaaggccatgtgcgcttc
gataatgtttgcttccgttatgaaggccaggaaacccgggcgctggatggcatcaacttt
gatgtgccgccgggcaagaccctggcgctggtgggccgctccggttccggtaaatccacc
attgccagcctgattaaccgtttctacaacggcctggagcagggagccattgagctcgat
ggcgtgaatgttgaagattaccgcctgaagaacctccgtagtcaggtagcgttggtcagc
cagcaggtgaccctgttcaacgacaccattgccaataacatcgcctacgcctgcccctgg
gaattgacccgcgagcagattgtggaagccgcgactctggcccacgcgatggagtttatc
aataagcttcctgatggcctggatactcaggttggtgaaaacggcgtgctgctttccggc
ggtcagcgtcagcgtatcgccattgcccgcgccatgctgcgtaatgcgcccgtgcttatt
ctcgatgaagcaacttcagcgctcgatactgagtctgaaaaagccattcaggaaggcctt
gaaaacctgcgtcagaaccgcacttccatcgtgattgcccacaggctgtcgaccattgaa
agtgccgatgaaattctggtgatagagcagggccagattgttgagcgtggcaaccataag
tcgctgctggcgcaggatggtatgtacgccaagctctatcagatgcagttttccgcctga
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