Shewanella khirikhana: STH12_00929
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Entry
STH12_00929 CDS
T06711
Symbol
yngG
Name
(GenBank) Hydroxymethylglutaryl-CoA lyase YngG
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
skh
Shewanella khirikhana
Pathway
skh00280
Valine, leucine and isoleucine degradation
skh00650
Butanoate metabolism
skh00907
Pinene, camphor and geraniol degradation
skh01100
Metabolic pathways
skh01120
Microbial metabolism in diverse environments
skh04146
Peroxisome
Module
skh_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
skh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
STH12_00929 (yngG)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
STH12_00929 (yngG)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
STH12_00929 (yngG)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
STH12_00929 (yngG)
Enzymes [BR:
skh01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
STH12_00929 (yngG)
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GFIT
Motif
Pfam:
HMGL-like
Motif
Other DBs
NCBI-ProteinID:
AZQ10065
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All DBs
Position
complement(1079386..1080276)
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AA seq
296 aa
AA seq
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MALPSHISLFEVGPRDGLQNEKQVSTADKILLVENLAAAGVKRIEAASFVSPKWVPQMAD
SGEVLKGISRVAGVRYSALTPNLKGLELALDANASEVAVFAAASEGFSQKNINCSIEESI
ERFIPLIEKAKEHNLPVRGYVSCVLGCPYDGEIAVSEVARVSEILYKLGCYEISLGDTIG
VGTPVKARKMVEAVAAKVPADKLALHFHDTYGQALANILACLESGIRTLDTSVAGLGGCP
YAKGASGNLASEDLVYMLHGMGIDTGIDLGKLIEAGNRISAALGRQNGSKVARALS
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atggcactgccttcccatatcagcctgtttgaagtcggcccccgtgacggcctgcaaaat
gaaaaacaggtcagcactgccgataaaattttgttggtcgaaaaccttgccgccgcaggg
gttaagcgcatcgaggcggcaagttttgtttcccccaagtgggtgccgcaaatggccgac
tcaggcgaggttctcaaggggatttcccgtgtggcaggcgtgcgttacagcgcccttacc
cctaatttaaaggggctggaacttgcccttgacgccaatgcctcagaggtagctgtattt
gccgctgcctccgagggctttagtcagaagaacatcaactgctcgattgaagagtcgatt
gagcggtttatcccattgatagaaaaagcaaaagagcacaatttgccggtgcgcggttat
gtctcctgcgtgctcggctgcccctacgatggcgagatagccgtaagcgaagtggcgcga
gtgtctgaaattctgtacaaactcggctgctatgaaatttctttgggtgacaccataggc
gttggcacgcccgtaaaggcccgtaaaatggttgaagccgtggcagcaaaagtgcccgcc
gataagctcgcgctgcactttcacgacacctacggccaggcgctcgccaatatcctggcc
tgccttgagagcgggatccgcaccttggatacctcggtggcaggcctcggcggctgcccc
tatgccaagggtgcgtcgggcaatcttgccagcgaagatctggtgtatatgctccatggc
atgggcatagacacaggcatcgaccttggcaaactgattgaggccggtaaccgtatcagc
gccgcccttggcagacaaaacggctccaaagtggctcgagcactgagctag
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