Shewanella khirikhana: STH12_00935 Help Entry STH12_00935       CDS       T06711                                  Name (GenBank) murein L,D-transpeptidase   KO K21470   L,D-transpeptidase YcbB Organism skh  Shewanella khirikhana Brite KEGG Orthology (KO) [BR:skh00001]  09180 Brite Hierarchies   09181 Protein families: metabolism    01002 Peptidases and inhibitors [BR:skh01002]     STH12_00935    01011 Peptidoglycan biosynthesis and degradation proteins [BR:skh01011]     STH12_00935 Peptidases and inhibitors [BR:skh01002]  Cysteine peptidases   Family C82    STH12_00935 Peptidoglycan biosynthesis and degradation proteins [BR:skh01011]  Peptidoglycan biosynthesis and degradation   Transpeptidase    STH12_00935 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Scaffold YkuD PG_binding_1 Motif Other DBs NCBI-ProteinID:  AZQ10071 LinkDB All DBs Position complement(1086805..1088601) Genome browser AA seq 598 aa AA seqDB search MIRRHSAKLLPAVLALLLANTAALPTAYALEQAQTASATAAENVRQNTQQAGTPTEAPSA MPLSGSALKLSQLLEPISLGESDTLGAAVLGSPELLVRFYQNRQFAPLWTDPDYSREAIG ILDGAADDGLLPADYHAELLKTLQNDDSKALEYELLLTDGIITLGTHLMNGKVNPQTLGR TWNYEEVTVNFGYLAKELDRHVREKSLAQALDTLRPQYQPYRDMKAHLKRMQTLAANQPF AVIPLDATIRPGKPSPSLAAIAERLTLLGYLTKDADAQTNTAANSTTASTSSALTLSSEL LQAVKEFQASHSLKPDGVIGKGTMAALNVPFAERAKQIQVNLERARWLSADLSSDFLIVN LAGYQLKLFRENRLDWETDIIIGKVSSKTPLFKSRLKYMVVNPTWTVPRSISREIIWHLK KDPEYLQKKNFVLRTASGAPADSSGIDWQTVNPRSFPYWFVQQPSENNALGQIKFIFPNA HSIYLHDTPAKSLFSQEDRAFSHGCIRVKDPLVLAERLMSPAPNWSPDSLNQSLASGQTK QIFLAEPLDILIMYWTAETRDGKLQFYKDIYKRDQAVADALLGQRHSRIAAAGDPNLL NT seq 1797 nt NT seq  +upstreamnt  +downstreamnt atgatcagaagacactcagccaagctgctgccagccgtgcttgctttactgcttgccaac acagccgcattgccgacagcgtatgcactggagcaggcacaaaccgcctccgccactgcc gcagaaaacgttcgacaaaatacccagcaagccggcacgccaaccgaagcgccatcagcc atgccactcagcggcagcgcgctgaagctgtcgcagctgctcgaacccatcagcctgggc gagtcagataccctgggcgccgcagtgctcggcagccccgaactgctggtacgcttttat cagaatcgtcagttcgcaccgctgtggaccgaccctgactacagccgcgaagccattggc attctggatggcgcagccgatgatggcctgctgcctgccgattaccatgcagaactgcta aagacgctgcaaaacgatgacagcaaggcgctggaatatgagttgctgctcaccgacggc atcatcaccctgggcacccatttgatgaacggcaaggtaaacccgcaaaccctgggtcgc acctggaactatgaagaagtcacggttaattttggttatctggccaaggagctagaccgc catgtgcgggaaaagtcgctggcacaggcgctggataccctgcggccccagtatcagcct taccgtgatatgaaggcgcacttaaaacgcatgcaaacgttggcggcgaaccagcccttt gcggttattccccttgacgccaccatacgtccgggcaaaccatcacccagccttgctgcc attgccgagcgtttaacgctgcttggctatctgaccaaagatgcggatgcgcaaaccaat actgctgcaaatagcaccactgccagcacctcctcagccttaaccctcagtagcgaactg ctgcaagcggtgaaagagttccaggcaagccattcactcaaacccgacggcgttattggc aagggcaccatggcggccttaaacgtgccttttgccgagcgggccaaacaaattcaggtc aatcttgagcgggcccgctggttgtcggctgacttgtcgtctgactttttgattgtgaat ctggccggttaccagctgaagctgtttcgtgaaaatcgcctcgattgggaaaccgacatc attatcggcaaggtgagttcaaaaacgccgctgttcaagtcgcgcctcaaatacatggtg gtcaaccccacctggactgtgccgcgctccatcagccgcgaaatcatctggcacctgaaa aaagaccctgaatatctgcaaaagaaaaacttcgtgctgcgcaccgcctcgggcgccccg gccgacagcagtggtatcgattggcaaacggttaacccaagaagcttcccctactggttc gtacaacagccgtcggagaataacgccttggggcaaatcaagtttatcttccccaacgct cactcgatttacctgcacgataccccggccaaaagcctgttcagtcaggaagaccgcgcc ttcagccacggctgtattcgggtaaaagacccactggtgctggcagaacgattaatgtcg ccagcccccaactggtcaccggacagccttaatcagtcgctggcatccgggcaaaccaag caaatcttcctcgctgagccgctggatatcctgatcatgtactggaccgccgagactcgt gacggcaagcttcagttctataaagatatttacaagcgcgatcaggctgtggccgacgcg ctgctgggtcagcgtcactccagaattgccgccgcaggcgatccaaacctgctgtaa

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