Shewanella khirikhana: STH12_00956
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Entry
STH12_00956 CDS
T06711
Symbol
hmrR
Name
(GenBank) HTH-type transcriptional regulator HmrR
KO
K19591
MerR family transcriptional regulator, copper efflux regulator
Organism
skh
Shewanella khirikhana
Brite
KEGG Orthology (KO) [BR:
skh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
skh03000
]
STH12_00956 (hmrR)
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
skh01504
]
STH12_00956 (hmrR)
Transcription factors [BR:
skh03000
]
Prokaryotic type
Helix-turn-helix
MerR family
STH12_00956 (hmrR)
Antimicrobial resistance genes [BR:
skh01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexPQ-OpmE [MD:
M00769
]
STH12_00956 (hmrR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MerR-DNA-bind
MerR_1
MerR
Ig_TMEM131L_5
Lipase_chap
ZSWIM1-3_C
UBAP-1_UBA2
Motif
Other DBs
NCBI-ProteinID:
AZQ10092
LinkDB
All DBs
Position
complement(1110875..1111264)
Genome browser
AA seq
129 aa
AA seq
DB search
MKIGDVARVTGLSVKSIRYYHDIGLVTANRGDNGYRVYDKATLESLRFVHQCREMGFSID
ECRSLLALQQNPARAAGEVKALAEVHLSTLADKIRRMQALHKQLGELVSQCQGGEQSNCP
ILASLATDT
NT seq
390 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattggcgacgtggcccgcgtcacagggctaagcgtaaaaagcattcgctattac
cacgatatcgggctggtaacggccaaccgtggtgacaacggctatcgggtgtatgacaag
gccacgctggagagcctgcgctttgtgcatcagtgccgtgaaatggggttctccattgat
gaatgtcgcagcctgctggcactgcagcaaaatccggcacgggccgccggcgaagtgaaa
gcgctggcggaagtacacctgagcacgctggcggacaaaatccgccgtatgcaggcgctt
cataaacagcttggtgaactggtttcgcagtgccagggcggcgagcaaagcaactgccct
attctggcctcacttgccaccgacacctga
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