Shewanella khirikhana: STH12_01057
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Entry
STH12_01057 CDS
T06711
Symbol
sdhB
Name
(GenBank) Succinate dehydrogenase iron-sulfur subunit
KO
K00240
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
]
Organism
skh
Shewanella khirikhana
Pathway
skh00020
Citrate cycle (TCA cycle)
skh00190
Oxidative phosphorylation
skh00650
Butanoate metabolism
skh00720
Other carbon fixation pathways
skh01100
Metabolic pathways
skh01110
Biosynthesis of secondary metabolites
skh01120
Microbial metabolism in diverse environments
skh01200
Carbon metabolism
Module
skh_M00009
Citrate cycle (TCA cycle, Krebs cycle)
skh_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
skh_M00149
Succinate dehydrogenase, prokaryotes
skh_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
skh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
STH12_01057 (sdhB)
00650 Butanoate metabolism
STH12_01057 (sdhB)
09102 Energy metabolism
00190 Oxidative phosphorylation
STH12_01057 (sdhB)
00720 Other carbon fixation pathways
STH12_01057 (sdhB)
Enzymes [BR:
skh01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
STH12_01057 (sdhB)
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Gene cluster
GFIT
Motif
Pfam:
Fer2_3
Fer4_8
Fer4_17
Fer4_10
Fer4_9
Fer4_7
Fer4_18
Fer4_16
Fer4
Fer4_4
Motif
Other DBs
NCBI-ProteinID:
AZQ10193
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All DBs
Position
1206366..1207073
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AA seq
235 aa
AA seq
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MKLEFSVYRYNPDVDTKPRMQDYSFEVPDGSDMMVLDALLKLKEIDPTLSFRRSCREGVC
GSDGMNMNGKNGLACITPISTFKGKKIEIRPLPGMPVVRDLVVDLSQFYKQYEKIKPYLI
NDEKKPAREHLQSPEERAHLDGLYECIMCACCSTACPSFWWNPDKFVGPSGLLHAYRFLI
DSRDTATEERLAELDDAYSVFRCHGIMNCVDVCPKGLNPTKAIGHIKSMLLKRAV
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgaagttggagttttcagtttatcgttacaatcctgacgtagataccaagccacgtatg
caggattacagcttcgaagtgcctgatggctcagacatgatggtgcttgacgcgctgttg
aagctgaaagaaatcgatccgacgctgtcgttccgccgttcatgccgtgaaggtgtgtgt
ggttcggacggtatgaacatgaacggtaagaacggcctggcttgtatcacgcctatctct
accttcaaaggcaagaagattgaaatccgcccactgcccggcatgcctgtggtacgtgac
ctggtggtagacttgtctcagttctacaagcagtacgagaagatcaagccatacctcatc
aacgacgagaagaagcctgcccgtgaacacctgcagagcccagaggagcgcgcgcacctc
gatggtctgtacgagtgcatcatgtgcgcctgctgctcgaccgcctgtccatcattctgg
tggaaccccgacaagttcgtgggtccaagtggtctgctgcacgcgtatcgcttccttatc
gacagccgcgataccgcgactgaagagcgtctggctgagcttgacgacgcctacagtgtg
ttccgttgccacggcatcatgaactgcgtagacgtatgtccaaaaggactgaacccgacc
aaggcgattggacacatcaagtccatgctgctgaagcgggctgtgtga
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