Shewanella khirikhana: STH12_01118
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Entry
STH12_01118 CDS
T06711
Symbol
colA
Name
(GenBank) Microbial collagenase precursor
KO
K07004
uncharacterized protein
Organism
skh
Shewanella khirikhana
Brite
KEGG Orthology (KO) [BR:
skh00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99997 Function unknown
STH12_01118 (colA)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PKD_4
PKD
LTD
Exo_endo_phos
Exo_endo_phos_3
LEA_2
Motif
Other DBs
NCBI-ProteinID:
AZQ10254
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All DBs
Position
1265855..1268671
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AA seq
938 aa
AA seq
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MKTKASLVALALGSVSAGAFAADTLVMSEYVEGSSNNKAIEIYNPTNATVDLSEYSLKFY
FNGNSSAGSQIALTGSLAAGATHVVADNDASVDILSRTQQQSNVSFFNGDDAIVLEHLGS
VIDSLGQIGVDPGSEWGTGDLSTANNTLRRDPNNLVADTDPFDAVTLATWQGFAQDDFSD
LGNFSAGPVEPPSEGLVCGDAATAIHALQGSGDASPLVGQIVEVEAIVVSNQEAGLKGLF
LQMSDAEVDNDPATSEGVFLYTGSAPTGYMAGDRIRVKAKIVEYQGLTELSNMTDKALCA
TQQPLPGAAQLSLPVNDVAELEAFEGMLVNFSQNLVVNEVYNLGRYGEIMLGGSRHFIGT
QVATPGADALAVIAANKRDSILLDDGKTSQNPDPVIYPAPGLSASNTVRVGDTVTNLSAV
LHYGFGVYRLMPVDTVNFVATNPRTEAPALDAGNLKVASFNVLNYFNGDGLGGGFPTARG
ANTAEEFERQRAKIISAMAAIDADVLGLMEIENDGYGAESAIADLVNGLNGATEAGRYSF
VNPGVAAIGTDAISVGIIYRADRVSPEGAAKILDSSNSALDDSGAVLFNDGKNRPMLTQA
FRHLDTDETLVLAVNHLKSKGSDCVAENDPDLGDGQGNCNLTRTRAAKAVGLFLAAEYPE
SKVLVIGDLNSYAKEDPLTALSDAGLTELFAHLGKEGAYSYVFSGESGQLDHALASNELL
DQVVDVTEWHINTDEPRILDYNVEFKSAGQIESLYSNDGYRSSDHDPVVISLQLERANEL
PVADFGFDIRGRKVKFAASASDADGQVQSLAWDFGDGTQGSGDAVTHKYKAPGNYQVTLT
VTDDMGGSTVVSKLVSVQTSPDNAAPVAVIEHYDLVFVDLFISASYDTDGRIRKQRWEFS
DGVKFASKWVLRRPGRADSVTLTVTDNEGATDSTSLSF
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccaaagcgtcccttgtcgctttggcgctgggcagtgtgtctgccggcgccttt
gctgccgatactctcgtcatgtctgaatatgtcgagggctccagtaacaacaaagccatt
gaaatctacaatcctaccaacgccactgttgacttgagcgaatacagcctcaagttctac
ttcaatggcaacagcagtgcgggcagccaaattgccctgaccggttcgctggccgccggt
gccacccatgtggtggccgacaatgacgccagcgtcgatatcctgagccgtacccagcag
caaagcaatgtgagcttcttcaatggcgacgatgccattgtgcttgagcatttgggctct
gtgattgacagcctgggccagattggcgttgaccccggcagcgagtggggcacgggcgat
ctgtccaccgccaacaacaccctgcgccgcgacccaaataatctggttgccgataccgac
ccttttgatgccgtgaccctggccacctggcagggctttgcccaggatgacttcagcgac
ctgggtaacttctctgcaggtccggtagagccgccatcggaaggtttggtgtgtggcgat
gcggccaccgccatccatgcgctgcagggcagcggcgatgccagcccgctggttggccag
attgtggaagttgaagccatagtcgtcagcaatcaggaagccggactcaaggggctgttc
ctgcagatgagcgatgctgaggttgataacgaccctgccacctctgaaggtgtgttcctc
tacaccggcagtgcgccaaccggttatatggccggtgaccgtatccgcgtgaaggctaaa
atcgttgaatatcagggcctgactgaactgtctaacatgaccgacaaggcgctttgcgcg
actcagcagccactgcctggcgccgcgcagctcagcctgccggtgaatgatgtggcagag
cttgaagcctttgaaggcatgttggtgaacttcagccagaatctggtggtgaacgaggta
tacaaccttggccgctatggtgagatcatgctgggcggcagccgccactttatcggcacc
caagtggccacgccgggcgccgatgcgctggcggtgattgctgccaacaagcgcgacagc
atcctgctggatgatggcaaaaccagccagaacccagaccctgttatctatccggcgccg
ggtctttctgccagcaacacagtgcgggtaggggacacagtgaccaacttgagcgccgtg
ctgcactatggcttcggcgtgtatcgcctgatgccggtggataccgttaactttgtggcc
accaacccacgtaccgaggcgccagcgctggatgcgggcaacctcaaggtcgccagcttc
aacgtgcttaactacttcaatggcgatggtctgggcggcggcttccccactgcccgtggt
gccaacaccgctgaagagtttgagcgtcagcgcgccaaaatcatcagcgccatggcggcc
atcgatgccgatgtgctgggtctgatggaaatcgaaaacgacggctatggcgctgagtcc
gccattgccgatttggtgaatggcctcaatggcgccaccgaagccggtcgctacagcttc
gtaaaccccggcgtagccgccataggcactgacgccatcagcgtgggcattatctaccgc
gccgaccgcgtcagccccgaaggcgctgccaaaatcctcgacagcagtaactctgccctg
gacgactcaggcgcagtgctctttaacgacggtaaaaaccgccccatgctgacccaggcg
ttccgccatctcgataccgacgaaaccctggtactggcggtaaatcaccttaagtccaag
ggcagtgactgcgtggccgaaaatgacccggatctgggcgatggtcagggcaactgtaac
ctgacccgtacccgcgctgccaaggctgttggcctgttcctggctgccgagtatcccgag
tccaaggtgctggtgattggtgatttgaactcctacgccaaggaagatccgctgaccgcc
ctgagcgatgccggtttgactgaactcttcgcccacctgggtaaagaaggtgcttactct
tacgtgttctccggcgagtcaggtcagctcgaccatgcactggcaagcaatgaactgctg
gatcaggtggtggatgtgaccgagtggcatatcaacaccgacgagccgcgtattctcgac
tataacgttgagttcaagagtgccgggcagattgagtcgctctacagcaacgatggctac
cgttcatcggatcacgatcctgtggtgatttcactgcagctggagcgtgccaatgagctg
ccggttgccgacttcggctttgacatccgtggccgcaaggtgaagtttgcagccagtgcc
agcgatgctgacggtcaggtgcaatcccttgcctgggactttggcgatggcactcagggc
agcggtgatgctgtgacccacaagtacaaggccccaggtaactatcaggtgactttgact
gtgaccgacgacatgggtggcagcactgtggtcagcaagctggtttccgttcaaaccagc
cctgataacgcggcgcctgtcgctgtgattgagcactatgacctggtgtttgtggacctg
ttcatatctgccagctacgacaccgatggccgcattcgtaagcagcgctgggagttcagc
gacggcgtgaagtttgcctccaagtgggtgctgcgccgccccggccgtgccgacagcgta
actcttaccgtgaccgacaacgaaggcgccactgacagtacaagtctgagtttctaa
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