Shewanella khirikhana: STH12_01248
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Entry
STH12_01248 CDS
T06711
Name
(GenBank) multidrug efflux system subunit MdtC
KO
K07003
uncharacterized protein
Organism
skh
Shewanella khirikhana
Brite
KEGG Orthology (KO) [BR:
skh00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99997 Function unknown
STH12_01248
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Gene cluster
GFIT
Motif
Pfam:
MMPL
Patched
Motif
Other DBs
NCBI-ProteinID:
AZQ10378
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Position
1429636..1431942
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AA seq
768 aa
AA seq
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MLEKLVNGFESFLFRHRGWVISLFVLLTAFLGYQASQLKMDAAFVKNIPLNHSYMQTYLK
HQKDFGGANSIMVAVEDTSGNIFNPVFFDALKNVHDQLFFIPGVDRSQVKSLFSPSTRFT
EVVEDGFAGGPVIPADYVNDTMGLAVVRDNIEKAGIVGRLIAEDYSAAMVSAQLMDFDPQ
TGEPLDTIALAAKLESELRGKFETDTIKVHIIGFAKMAGDVADGAKGVVLFFLIAIAITA
VMVFLFSRSVVLTLLPLACSLMAVVWQLGLLTVVGFGLDPMSILVPFLVFAIGVSHGVQI
INAVRQRVLDGQQTKAAAASAFRSLLVPGGVALLSDTVGFITLLAIDIGIIRELAISASL
GVAVIIFTNLILLPVVISFFDIKAKEDSGRAERAKAFWQPFSRFADIRVAVVVLLATAGV
YMLGLKGASEMKIGDLQGGAPALHADSRYNQDTFFITDHFSITTDVMTIITEAYPEACTY
HDALERIGEFEWQVGNTPGVESTASLASIARKVNAGFNEGNPKWEVLPRNTSSLVQAVGQ
IPTTSGLLNGDCSVMPVYLFLKDHKAETIEAVVAKVKAVSAELDTDKIQFKLASGPVGVM
AATNEAVAEAQTPMMLYVYGAVFVLCLISFRSIRATIAVILPLYVVSTLAQALMTKLEIG
LAVSTLPVIALGVGIGVDYGIYILSTMAVKLRDGMAVQQAYLEALQERGSAVIFTGLTLA
IGVSTWFFSALKFQMDMGILLTFMFLVNMLGAIIILPALTALFWPKRR
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgttggaaaaactggtcaacggctttgaaagctttctttttcgtcaccgtggctgggtg
ataagcctttttgtgctgctgacggccttccttggctatcaggcaagccagctgaaaatg
gatgcggctttcgttaagaacattccgctcaaccacagttacatgcaaacctacctcaag
caccagaaggattttggcggcgccaactccatcatggtggcggtggaagacaccagcggc
aatatcttcaatccggtgttttttgatgccctgaagaatgtgcacgatcagctgttcttt
atccccggagtcgaccgctcgcaggtgaaatcactgttttcgccgtcaacccgctttacc
gaagtggtagaagacggctttgccggcggcccggtgatccccgccgattacgtgaacgat
acgatgggccttgcggtggtgcgcgacaatatcgaaaaagccggtattgtcgggcggctg
attgccgaagattacagtgctgccatggtgtcggcgcagctgatggactttgacccgcaa
accggcgagccgctggataccatagcgcttgcggccaagcttgagagtgagctcaggggc
aagtttgaaactgataccatcaaggtgcatatcataggttttgccaaaatggccggtgat
gtggccgatggcgccaaaggtgtggtgctgtttttcctgattgccatcgccattaccgcg
gtgatggtgttcctgttcagccgctcagttgtgctcaccttgctgccgctggcgtgcagt
ttgatggcggtggtatggcagcttggcttgctgaccgttgtcggcttcgggcttgacccc
atgtcgattctggtgccgtttttggtgtttgccatcggcgtaagccacggggtgcagatc
atcaatgcggtgcgccaacgggtgctcgatggccagcaaaccaaggccgcggccgcatcg
gcgtttcgcagcctgctggtgccaggtggcgtggcgctgctgtctgatactgtcggtttt
attactctgcttgccattgatatcggcatcatccgcgagctggcgatttcggcgtcgctg
ggtgtggcagtgattatctttaccaacctgatcttgctgccggtggtgatttccttcttt
gatatcaaagccaaggaagacagtggtcgtgccgagcgagccaaggcgttctggcagcca
ttctcgcgctttgccgatatccgtgttgccgtagtggtactgcttgccactgccggggtg
tacatgctggggcttaaaggcgccagtgagatgaagattggtgacttgcagggcggggcg
ccggcactccatgccgatagccgttacaatcaggacaccttctttatcaccgaccatttc
agtatcaccaccgacgtgatgaccatcatcaccgaggcctatcccgaagcctgtacttac
cacgatgcccttgagcgcatcggtgagtttgaatggcaggtgggtaataccccgggggtt
gagtccaccgccagcctggcgtccattgcccgcaaggttaacgccggttttaacgaaggc
aatcccaagtgggaagtgctgccgcgcaacacgtcaagcctggtgcaggcagtggggcaa
attccaaccacgtcggggcttttgaacggcgactgctctgtgatgcctgtgtatctgttt
cttaaagatcacaaggccgaaaccatcgaagcggttgttgccaaggtgaaggcggtgtcg
gctgagctggataccgataaaatccagtttaagctggcctcaggcccggtgggcgtgatg
gcggccaccaacgaagcggtggccgaggcgcaaacgccgatgatgctgtatgtctatggc
gccgtgtttgtgctgtgtcttatcagcttccgctccattcgcgccaccattgcggtaatt
ttgccgctgtatgtggtttctaccctggcgcaggccttgatgaccaagctggaaattggg
ctggcggtcagtaccttgccggtgattgccctcggcgtggggattggtgtggactatggc
atttatattctgtctaccatggcggtaaaactgcgtgatggcatggcagtacagcaggcc
tatctggaggcattgcaggagcggggcagtgcggtgatcttcactggtctgaccctggcg
attggggtgagtacctggttcttctcggcacttaaattccagatggatatgggaattttg
ctgactttcatgttcctggtaaatatgctcggggccattattattctgccggcgctgacg
gcattgttctggcccaagcgccgataa
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