Shewanella khirikhana: STH12_01316
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Entry
STH12_01316 CDS
T06711
Symbol
arnB
Name
(GenBank) UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase
KO
K19715
8-amino-3,8-dideoxy-alpha-D-manno-octulosonate transaminase [EC:
2.6.1.109
]
Organism
skh
Shewanella khirikhana
Brite
KEGG Orthology (KO) [BR:
skh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
skh01005
]
STH12_01316 (arnB)
Enzymes [BR:
skh01000
]
2. Transferases
2.6 Transferring nitrogenous groups
2.6.1 Transaminases
2.6.1.109 8-amino-3,8-dideoxy-alpha-D-manno-octulosonate transaminase
STH12_01316 (arnB)
Lipopolysaccharide biosynthesis proteins [BR:
skh01005
]
Lipid A
STH12_01316 (arnB)
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GFIT
Motif
Pfam:
DegT_DnrJ_EryC1
Aminotran_5
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
AZQ10438
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Position
complement(1502513..1503700)
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AA seq
395 aa
AA seq
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MPGFEIFGPEEKQEVADVMENGFTFRYNFDGMRNGRWKSREFEALLCEKIGVKHAHLLSS
GTSALTTALMAAGIGAGDEVIVPPFTFVASVEAIMMAGAVPVFAEIDETLCLSPEGIRAA
ITPRTKAVNFVHMCGSMGHMDEIKAICDEHGIVLMEDACQAIGGSYKGKGLGTIGQVGCF
SFDSVKTISCGEGGAVITNDETIYNHSHMFSDHGHDHIGNDRGAEKHPIMGLNFRISEMN
AALGLAQLRKLDTILDIQRKNKKLIKDAMAEIPEVSFRVIPDAEGDNAGFLSFMLPTEAR
TQEINKALAANGVDGCFYWYVNNWHYLKNWDHIQKLTAPAALPITLVADKPDYTQVSVPK
SDAIMSRTISMLIKLSWTEEQIQERIANIKKAFAQ
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgcccggttttgaaatttttggtcctgaggaaaagcaggaagtcgcagatgtcatggag
aacggctttaccttccgttataactttgacggcatgcgcaatggccgctggaagagccgc
gaatttgaagcgctgctgtgtgaaaagattggcgtaaaacacgcccacctgctgtccagc
ggtacctctgccctgaccaccgccctgatggctgccggcattggcgccggtgacgaagtg
attgtgcctccctttacctttgtggcctcagttgaagccatcatgatggcaggcgccgta
cctgtatttgccgaaatcgacgagaccctgtgtctgtcacccgaaggcatccgcgcggcc
atcaccccccgcaccaaggcggtgaactttgtgcacatgtgtggctccatgggtcacatg
gacgaaatcaaagccatttgtgacgagcacggaattgtgctgatggaagatgcctgtcag
gccatcggcggcagctacaaaggcaaaggcctgggcactatcggtcaggtaggctgtttc
tctttcgactcagtgaaaaccatttcctgtggcgaaggcggagccgttatcaccaacgac
gaaaccatctataaccacagccacatgttctctgaccacggtcacgaccacattggcaac
gatcgcggcgccgaaaagcaccctatcatgggtctgaacttccgtatcagcgaaatgaat
gccgccctgggtctggcgcagctgcgtaagctcgacaccatcctcgacattcagcgtaaa
aacaaaaagctgattaaagatgccatggcagaaatcccggaagtgagcttccgcgtgatc
cccgatgctgaaggcgacaacgccggcttcctgtcctttatgctgcctaccgaagcgcgc
acccaggaaatcaacaaggccctggccgccaacggcgtggatggctgcttctactggtac
gtgaacaactggcactacctgaagaactgggatcacatccagaaactgaccgcaccagcc
gcgctgccgatcacactggtggccgacaagcctgactacactcaggtttctgtgccaaaa
tccgatgcaatcatgagccgcaccatttccatgctcatcaagctcagctggactgaagag
cagatccaggagcgtattgccaacatcaagaaggcatttgcccaataa
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