Shewanella khirikhana: STH12_01334
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Entry
STH12_01334 CDS
T06711
Symbol
amy
Name
(GenBank) Alpha-amylase precursor
Organism
skh
Shewanella khirikhana
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Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
hDGE_amylase
Motif
Other DBs
NCBI-ProteinID:
AZQ10456
UniProt:
A0A3S9L4G3
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Position
complement(1522082..1524097)
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AA seq
671 aa
AA seq
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MAMDFVISAHAARPFRFKRRIRAIAAPLLSLAGLLPLHSLAAEKLELNSDISAATAPDSL
QTPAPLIYQLLPRVFGNQNLTNKPWGSIEENGSGKFADINDSVLADIADLGVTHVWYTGV
LHHASLTDYSAYGIDKDDADVVKGIAGSPYAIRDYYNVNPDLALDPAKRLDEFKALIERT
HAAGLKVIIDIVPNHVARRYRSISAPEGVEDFGARDITSVVFDKHNNFYYVPGSDFLVPQ
DTNRPPASNLDAVGAAQDGRFAEKPAKWTGNGSSAKQQQANQPGLNAPKPDDWYETVKLN
YGVAQDGTPHFPALADALAFAPIAQHQAFWARQTDLPDTWLKMRDISRFWLDLGVDGFRF
DMAEMVPVAFWSFLASDIKAKRSDALLIAEVYNPKLYPYFIGFGKLDLLYDKVGLYDTLK
AVSQGKAPIGLIQQRLREISRYAPHMLHFLENHDEQRIASPEFLGDAQKALPALAVSTLA
TDGPFMLYFGQTLGEDGSETGGFGKPSRTSIFDYVAAPAMARYLKTDPRGGFGSHSQPQE
LALRADYRALLALAPNIKATPGAQLTTHQGANMVNGKVSIHNYLSIRRGDYLILANFSDS
EVTNIANPANPFAKIELLAKAHANGNDKSPEADVNGAKAEPQLLLSLPQRSEANGKELAP
WGVNVYKLPSK
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atggccatggatttcgtcatctcagcccatgcagcacgcccttttcggtttaagcgacgc
atcagggctatcgcagcgccgctgctttcgcttgctggcctgctgccacttcacagcctt
gccgccgagaagctggagctgaactcagatatcagcgcggcaaccgcgcccgacagcctg
caaaccccggcgccgctgatataccagctgctgccacgggtgtttggcaatcaaaatctg
accaacaagccctggggcagcatcgaagaaaacggcagcggcaagtttgccgatatcaac
gattccgtgctggccgatatcgccgatttgggtgtgacccacgtgtggtacacaggggtg
ctgcaccatgcgtcgctcaccgactacagcgcctatggcatagataaagacgatgccgat
gtggtcaagggcatcgctggctcaccttacgccattcgcgactactacaacgtcaatccg
gatctggcgctcgaccctgcaaaacgcctggatgaattcaaagccctgattgagcgcacc
cacgctgcaggccttaaggtgattatcgatatagtgcccaaccatgtggcgcgccgttac
cgctccatcagcgcccccgaaggcgttgaagactttggcgcacgggacatcacctcggtc
gtgttcgataaacacaataatttttactatgtgcccggcagcgactttctggtcccccag
gacacaaacaggccacctgcctcaaaccttgacgctgtaggcgctgctcaggatggccgc
tttgcggaaaaaccagccaaatggaccggcaatggctcaagcgccaagcagcaacaggcc
aaccagccagggttgaacgcccccaagccagatgactggtatgaaacagtgaagcttaac
tatggtgtggcacaagatggcaccccccacttcccggcgctggctgacgcacttgccttc
gccccaattgcgcagcatcaggccttttgggcgcgccagaccgatttgcccgatacctgg
cttaagatgcgcgatatcagccgtttctggctcgatttaggggtcgatggttttcggttc
gatatggcagaaatggtacctgtggccttttggagcttccttgccagcgacatcaaggcc
aaacgcagcgatgcactgctgattgccgaagtgtacaaccccaagctgtatccctatttc
atcggctttggcaagttagatctgctgtacgacaaggtcggcctgtacgacaccttaaag
gccgtcagtcagggtaaggcgcccataggtctcatccagcagaggctcagagaaataagc
cgttatgcgccccatatgctgcatttcctggaaaatcacgacgagcagcgtattgccagc
cccgagttcctcggtgatgcgcaaaaagccttgcccgcactggcggtttcaacgcttgcg
accgacggcccctttatgctgtatttcggccaaaccctcggggaagacggcagtgaaacc
ggcggatttggtaagccaagccgcaccagtattttcgattatgtggctgcaccggccatg
gcaaggtacttaaaaaccgatccccggggcgggtttggcagccacagccagccacaggaa
ctggcactgcgggctgactatcgcgccctgctcgcgctggcgcccaacataaaggccacg
ccgggtgcccaactgacgacacatcaaggcgcaaacatggttaatggcaaggttagcatc
cacaattatctgagcatacgccgcggtgactatctgattttggccaacttttctgattca
gaagtcaccaacatcgctaatcctgccaatccgttcgccaagattgaactcctggccaag
gcgcatgcaaatggcaatgataaaagccccgaggccgatgttaatggcgccaaggccgag
ccgcagctgctgctaagtctgccgcagcgaagcgaggccaatggcaaagaactcgcgccc
tggggcgtgaatgtctacaagctgccttcaaaataa
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