Shewanella khirikhana: STH12_01365
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Entry
STH12_01365 CDS
T06711
Symbol
fumB
Name
(GenBank) Fumarate hydratase class I, anaerobic
KO
K01676
fumarate hydratase, class I [EC:
4.2.1.2
]
Organism
skh
Shewanella khirikhana
Pathway
skh00020
Citrate cycle (TCA cycle)
skh00620
Pyruvate metabolism
skh00720
Other carbon fixation pathways
skh01100
Metabolic pathways
skh01110
Biosynthesis of secondary metabolites
skh01120
Microbial metabolism in diverse environments
skh01200
Carbon metabolism
Module
skh_M00009
Citrate cycle (TCA cycle, Krebs cycle)
skh_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
skh_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
skh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
STH12_01365 (fumB)
00620 Pyruvate metabolism
STH12_01365 (fumB)
09102 Energy metabolism
00720 Other carbon fixation pathways
STH12_01365 (fumB)
Enzymes [BR:
skh01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.2 fumarate hydratase
STH12_01365 (fumB)
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Gene cluster
GFIT
Motif
Pfam:
Fumerase
Fumerase_C
DELLA
Motif
Other DBs
NCBI-ProteinID:
AZQ10487
UniProt:
A0ABN5TTJ4
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All DBs
Position
1563403..1564938
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AA seq
511 aa
AA seq
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MSENHSPVVIKQADFIESVADALQYISYYHPKDFIDAMAEAYEREQSAAAKDAIAQILIN
SRMSAEGKRPLCQDTGIVTCFVKVGMGVQWDKTDMTVQQMVDEGVRRAYTNPDNPLRASI
VADPAGARKNTKDNTPSVVHIDMVPGNHVEMAIAAKGGGSENKSKMVMLNPSDDIAAWVE
KTLPTMGAGWCPPGMLGIGIGGTAEKAAVMAKEALMESIDIHELMAKGAETAEEKLRLDI
FERANGLGIGAQGLGGLTTVLDVKIKSAPTHAASKPVVMIPNCAATRHVHFHLDGTGPAD
LSPPSLSDWPQITWEVGESVRRVNLDTVTQADIETWKSGDTLLLSGKMLTGRDAAHKRIQ
TLIESGEGLPEGVDFTGKFIYYVGPVDPVGDEVVGPAGPTTATRMDKFTDLMLDKTGLMG
MIGKAERGPATVESIKQHKAVYLMAVGGAAYLVSKAIKHARVVAFEDLGMEAIYEFDVQD
MPVTVAVDAQGVNAHETGPAIWKVNIQNAKA
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
gtgtcagagaatcactcgccggtcgtgatcaagcaggccgattttattgaaagtgttgcg
gatgcactgcaatacatctcctactaccaccctaaagatttcatcgacgccatggccgaa
gcctatgagcgcgagcagagcgcggctgccaaagacgccatcgctcaaatcctcattaac
tcccgcatgtcggccgaaggcaagcgtcctttgtgtcaggacaccggcatcgtcacctgc
tttgtgaaagtgggtatgggtgtgcagtgggacaaaaccgacatgacagtgcagcagatg
gtggatgaaggcgttcgccgcgcttacacgaacccggataacccgctgcgcgcatccatt
gttgccgaccccgccggtgcccgtaaaaacaccaaagacaataccccatctgtggtgcat
atcgacatggtaccaggcaaccatgtggaaatggccattgccgccaagggcggcggcagt
gaaaacaagtccaagatggtgatgctgaacccatccgatgatatcgccgcctgggttgaa
aagaccctgccaaccatgggcgccggctggtgtcctcctggtatgctgggtattggtatc
ggcggcaccgccgagaaagccgctgtaatggccaaagaagccctgatggagagcatcgat
atccacgagctgatggccaaaggcgctgaaaccgcagaagaaaagctgcgtctggatatt
tttgagcgcgccaacggtttgggtattggtgcccagggcctgggcggcttgaccacagtg
ctggatgtgaaaatcaaatcagcgccaacccacgccgcctccaagccggtggtgatgatc
cccaactgcgccgcgacccgtcacgtacacttccacctggatggcacaggtcctgccgat
ctgtcaccgccaagcctcagtgactggccacaaattacctgggaagtgggcgagagcgtg
cgccgcgtaaatctggatacagtgactcaggccgacatcgaaacctggaagagcggtgac
accctgctgctgtctggtaagatgctcaccggccgtgacgctgcccacaagcgcattcaa
accctgattgagtcgggcgaaggtctgccggaaggcgtggacttcaccggcaagtttatc
tactacgtcggcccggtcgatccggttggcgacgaagtagtgggtcctgccggcccaacc
acagccacccgcatggataagtttaccgatctgatgctggataagaccggcctgatgggc
atgattggtaaggccgaacgtggtcctgccaccgttgagtctatcaagcagcacaaagcc
gtgtacctgatggccgttggcggcgctgcgtacctggtgtccaaagccattaagcatgcc
cgcgtggttgcctttgaagatctgggtatggaagccatctacgaatttgatgtgcaggat
atgcctgtgactgtggcggtggacgctcagggcgtgaacgcccacgagaccggcccggcc
atctggaaagtcaatatccagaacgccaaggcctga
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