Shewanella khirikhana: STH12_01457
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Entry
STH12_01457 CDS
T06711
Symbol
rarA
Name
(GenBank) Replication-associated recombination protein A
KO
K07478
putative ATPase
Organism
skh
Shewanella khirikhana
Brite
KEGG Orthology (KO) [BR:
skh00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
STH12_01457 (rarA)
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Gene cluster
GFIT
Motif
Pfam:
MgsA_C
AAA_assoc_2
AAA
RuvB_N
AAA_16
Mg_chelatase
AAA_5
AAA_30
AAA_22
Sigma54_activat
nSTAND3
AAA_19
AAA_14
AAA_2
ResIII
Sigma54_activ_2
AAA_3
DUF815
AAA_24
ATPase_2
DNA_pol3_delta2
Parvo_NS1
AAA_18
AAA_28
AAA_11
SRP54
ABC_tran
TniB
IstB_IS21
NPHP3_N
AAA_17
AAA_33
DUF5906
RNA_helicase
AAA_25
AAA_7
TsaE
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
AZQ10576
UniProt:
A0ABM7DA44
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Position
1675223..1676551
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AA seq
442 aa
AA seq
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MSLSFDFSPDFNPLAARMRPARVEEYIGQSHLLGEGKPLRQALLAGKVHSMLLWGPPGTG
KTTLAELVARYANAHVERISAVTSGVKEIRAAIEQAKNVAQSRGQRTLLFVDEVHRFNKS
QQDAFLPFIEDGTVIFIGATTENPSFEVNNALLSRCRVYLIKRLDDDAIGQILEQANSDE
ARGLGKRGLRLTPELKAAIARLCDGDARKALNLIELMADLLPDGGEYTVELLSEVAGHQA
AGYDKNGDQYYDLISAVHKSIRGSAPDAALYWFCRILEGGGDPLYVARRLLAIASEDIGN
ADPNAMTVALNAWDCFHRVGPAEGERAIAQAVLYLASAPKSNAVYTAFKAARALARETGN
APVPNHIRNAPTKLMSELGMGEGYRYAHDEEGAFAAGENYFPDTLKHSRFYQPTERGFEK
RIKDKLQNLEALNQQSGRKRYE
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
gtgtcactgagttttgatttcagccccgactttaatcccctggccgcaagaatgcggcca
gccagggtggaagagtacataggtcagtcgcatctgcttggcgaaggcaaacctttgcgc
caggcgctgctggcgggcaaggtgcactccatgctgctgtgggggccgcccggtaccggc
aaaaccacgctggccgaactcgttgcccgttatgccaatgcccatgtggagcgcatatcc
gcggtaacctcaggggttaaggaaatccgcgccgccatcgagcaggccaaaaatgtggcc
cagtcccgtggtcaacgcaccttgttgtttgttgacgaagtgcaccgctttaataaaagt
caacaggatgccttcctgccttttattgaagacggcactgtgatttttatcggcgcaacc
accgaaaacccgtcttttgaagtcaacaatgcactgctgtcccgctgccgtgtctatctc
atcaagcgtcttgatgatgacgccattggccaaattcttgagcaggccaacagtgacgag
gcgaggggacttggcaaacgcggtttgcggctgaccccggaactgaaggccgccattgcc
agactctgtgacggagatgcccgcaaggcgctgaatttaattgagttgatggccgacttg
ctgccagacggcggcgagtatacggttgagctcctcagtgaagtcgccggtcatcaggcg
gcgggttacgataaaaacggcgatcagtattacgaccttatcagtgcggtgcacaaatcc
attcgtggctcggcgcctgatgccgcactttactggttttgccgcatccttgagggcggc
ggcgatcctttatacgttgcccgcaggctgctggccattgcctcggaagatatcggcaat
gccgaccccaatgccatgacagtcgccctgaatgcctgggactgtttccaccgcgtcgga
ccggctgaaggcgagcgcgccattgctcaggcggtgctctatcttgccagcgcgcccaaa
agcaatgcagtttacaccgcctttaaggccgcgcgggcacttgcccgggaaaccggcaat
gcacccgtgcccaaccatatacgcaatgcgccaaccaaactgatgagtgagcttggcatg
ggtgaaggctaccgttacgcccatgatgaagagggcgcattcgccgccggtgagaattac
ttcccagatacgctcaaacacagccgcttttatcagcccaccgagcgtggatttgagaaa
cgaattaaagataaactgcaaaatctcgaggcgcttaaccagcaaagtgggcgaaaacgt
tatgaataa
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