Shewanella khirikhana: STH12_01481
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Entry
STH12_01481 CDS
T06711
Symbol
ttcA
Name
(GenBank) tRNA 2-thiocytidine biosynthesis protein TtcA
KO
K14058
tRNA 2-thiocytidine biosynthesis protein TtcA
Organism
skh
Shewanella khirikhana
Brite
KEGG Orthology (KO) [BR:
skh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
skh03016
]
STH12_01481 (ttcA)
Transfer RNA biogenesis [BR:
skh03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
STH12_01481 (ttcA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP_bind_3
Motif
Other DBs
NCBI-ProteinID:
AZQ10600
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All DBs
Position
1695863..1696837
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AA seq
324 aa
AA seq
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MSDVVMSEIQQDELSKKQITRLNKLQKRLRREVGSAIADYNMIEEGDRVMCCLSGGKDSY
AMLDILINLQQRAPVSFEIVAVNLDQKQPGFPEHILPAYLDSLGIPYHILEKDTYSIVKD
KIPEGKTTCSLCSRLRRGTLYGFAQRIGATKIALGHHRDDIIETLFLNMFYGGKMKAMPP
KLLSDDGANVVIRPLAYCREKDIEEYAQLKNFPIIPCNLCGSQENLKRAAIKDMLKQWDR
QHPGRIETIFTAMQNTAPSQGVDREQFDFVSLKQDPNAEFRGDVAEADLPAFDFMDVSNS
GHIDLDKAAKPVGERIDIVSTFTP
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacgttgtaatgtctgaaatccagcaagacgaactttccaaaaaacagatcact
cgcctcaataagctgcaaaagcggctgcgtcgcgaagttggcagcgctattgccgactac
aacatgatcgaagaaggcgaccgggtgatgtgctgcctgtccggcggcaaagacagctat
gccatgctggatattctgataaacctgcaacagcgcgcccctgtgtcgttcgaaatcgtt
gcggtaaacctggatcagaagcaacctgggtttcctgagcacattctgccagcctacctc
gacagccttgggatcccttatcacatccttgagaaagacacttactctatcgttaaggat
aaaatccctgaaggcaaaaccacctgctctttgtgctctcgcctgcgtcgcggcaccctt
tatggttttgcccagcggatcggcgccacaaaaatagccctgggtcaccacagagatgac
atcatagaaaccctgtttctgaacatgttctacggtggaaagatgaaagccatgccgcca
aagctgctgtctgacgacggtgccaacgtggttattcgtcccctcgcctattgccgcgag
aaagacatcgaagagtacgcgcagcttaaaaacttccccattattccgtgtaacctgtgt
ggttcacaggaaaacttaaagcgtgccgccattaaagacatgcttaagcaatgggaccgt
cagcaccctggccgtatcgaaactatcttcaccgccatgcaaaatacggcgccatctcaa
ggggttgaccgcgagcagtttgattttgtgtcgcttaagcaagatcccaatgccgagttc
cgtggtgatgttgccgaggctgatttgcccgccttcgactttatggacgtctccaacagc
ggccatatcgatttggacaaagcggccaagcccgtgggtgagcgcattgatattgtgtct
accttcacgccctaa
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