Shewanella khirikhana: STH12_01495
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Entry
STH12_01495 CDS
T06711
Symbol
ybbH
Name
(GenBank) putative HTH-type transcriptional regulator YbbH
KO
K19337
RpiR family transcriptional regulator, carbohydrate utilization regulator
Organism
skh
Shewanella khirikhana
Brite
KEGG Orthology (KO) [BR:
skh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
skh03000
]
STH12_01495 (ybbH)
Transcription factors [BR:
skh03000
]
Prokaryotic type
Helix-turn-helix
Other families
STH12_01495 (ybbH)
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_6
SIS
SIS_2
HTH_Tnp_ISL3
HTH_29
MarR
HTH_24
Penicillinase_R
HTH_Crp_2
DUF3640
Motif
Other DBs
NCBI-ProteinID:
AZQ10612
UniProt:
A0ABN5TT38
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Position
1710636..1711490
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AA seq
284 aa
AA seq
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MNTLEKVQKSLNQFSKSERKVAEVILASPQTAIHSSIATLAKMADVSEPTVNRFCRRLDT
KGFPDFKLHLAQSLANGTPYVSRHVEEDDSPESYTTKIFESSMASLDTARQSLDMQAINK
AVDILTQAKTISFFGLGASAAVAHDAQNKFFRFNVPVICFDDVLMQRMSCINSNEGDVVV
LISHTGRTKSLIDIARLARENGAAVIAITARNSPLSVECTLAVTMEVPEDTDMYLPMASR
LAQLVIIDVLATGFTLRRGPRFRDSLKRVKEALKESRINKDPDL
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaataccctagaaaaggtccagaaaagtctaaaccaattcagcaagtcagaacgcaaa
gtggcagaagttatcctggcctctccacagactgcgatccactccagtatcgcaaccctg
gccaagatggccgatgtgagcgagcctaccgtcaaccgtttttgtcgtcgtctcgatact
aaaggctttcctgattttaaattacatctggcccaaagtcttgccaatggcacgccctac
gtcagccgccacgttgaagaagatgactcccctgagtcctacaccacgaaaatcttcgaa
tcttcaatggcttctttggacactgcccgccaaagcctcgatatgcaggccatcaataaa
gcagtggatatactgacccaggccaagaccatttctttctttggcctgggcgcgtccgcc
gccgtggcccacgatgcccagaacaaatttttccgttttaacgtacctgtgatttgtttc
gatgatgtgttgatgcagcgtatgagctgtattaacagcaacgaaggcgatgttgtggtg
ctgatttcccacactggtcgtaccaagtcattgattgatatagcaagacttgcacgcgag
aacggcgctgccgtgattgccattaccgcccgtaactcgcctttatcagtcgaatgtaca
ctggcagtcaccatggaagtgccggaagatacagatatgtacttgcccatggcgtcaaga
ctggcccagctggtgattattgacgtgcttgccactggatttaccctgcgccgcggtcca
agattcagagacagcctgaagcgcgtgaaggaagccctgaaggagtccaggatcaataaa
gatccggacctgtaa
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