Shewanella khirikhana: STH12_01536
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Entry
STH12_01536 CDS
T06711
Symbol
cmoB
Name
(GenBank) tRNA (mo5U34)-methyltransferase
KO
K15257
tRNA (mo5U34)-methyltransferase [EC:2.1.1.-]
Organism
skh
Shewanella khirikhana
Brite
KEGG Orthology (KO) [BR:
skh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
skh03016
]
STH12_01536 (cmoB)
Transfer RNA biogenesis [BR:
skh03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
STH12_01536 (cmoB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltransf_9
Methyltransf_23
Methyltransf_25
Methyltransf_11
Methyltransf_12
Methyltransf_31
CMAS
PCMT
PrmA
Motif
Other DBs
NCBI-ProteinID:
AZQ10645
UniProt:
A0A3S9L4X0
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All DBs
Position
1752226..1753218
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AA seq
330 aa
AA seq
DB search
MISFSSFYRQIADTNLQHWLETLPAVLGEWQRSHKHGNLPKWEKVLAKLNFPAPDELDLL
HSVTIGSGAQLSEGQQEKLENLLRILSPWRKGPFHVHGIHIDTEWRSDWKWDRVSPHISP
LANRTVLDVGCGSGYHMWRMLGEGAKRVVGIDPSALFLCQFEAIKRLIDVDSPVHLLPLG
IEELPPLDAFDTVFSMGVLYHRRSPIDHLLQLRDQLRMGGELVLETLVVDGDKDTVLVPR
DRYGKMNNVWFLPSIEALKLWLEKCDFTDVRCVNVDVTSLAEQRATGWMQNESLVDYLDP
QDVSLTVEGYPAPKRATFIAVKNRSSQDFD
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
gtgatcagtttctccagtttttaccgccaaatcgccgataccaatttacagcattggctc
gaaaccctgcccgccgtgctcggtgaatggcagcgaagccacaaacacggcaacctgccc
aagtgggaaaaggtgctcgccaaactgaactttccggctcccgatgagctggatttgctg
cacagtgtcactatcggcagcggcgctcagctcagtgaaggccagcaggaaaagctagaa
aacctgctgcgcatcctttcaccctggcgtaaaggcccgttccatgtgcacggtattcac
atcgataccgagtggcgcagtgactggaagtgggatcgggtttcgccccacatcagccca
ctggctaaccgcactgtactcgatgtgggctgcggcagtggctaccacatgtggcgtatg
ctgggtgaaggcgccaaacgtgtagtgggtatcgacccctcggcgctgtttttatgccag
ttcgaagccatcaaacgcctgattgacgttgactcgccggtgcatttactgccgcttggg
attgaagagctgccgccactggatgccttcgacactgtgttctctatgggcgtgctgtac
cacagacgctcgccaattgatcatctgctgcagcttagggatcaactgcgcatgggcggt
gagctggtgctcgaaaccctggtagtcgatggcgataaggacacagttctggtgccccgc
gatagatatggcaagatgaataatgtatggtttttgccatccatagaagcgcttaagctg
tggctcgaaaaatgtgattttaccgacgtgcgctgcgtgaacgtggatgtcacctcgctg
gcagagcagcgtgctaccggttggatgcaaaatgagtctctggtcgattacctcgaccca
caggatgtcagcctgacagtagaaggctaccccgccccgaaacgggccacctttattgcg
gttaaaaaccgcagtagccaggattttgattga
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