Shewanella khirikhana: STH12_01660
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Entry
STH12_01660 CDS
T06711
Symbol
rlmA_2
Name
(GenBank) 23S rRNA (guanine(745)-N(1))-methyltransferase
KO
K00563
23S rRNA (guanine745-N1)-methyltransferase [EC:
2.1.1.187
]
Organism
skh
Shewanella khirikhana
Brite
KEGG Orthology (KO) [BR:
skh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
skh03009
]
STH12_01660 (rlmA_2)
Enzymes [BR:
skh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.187 23S rRNA (guanine745-N1)-methyltransferase
STH12_01660 (rlmA_2)
Ribosome biogenesis [BR:
skh03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
STH12_01660 (rlmA_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Zn_ribbon_RlmA
Methyltransf_31
Methyltransf_25
Methyltransf_11
Methyltransf_12
Methyltransf_23
Ubie_methyltran
MetW
MTS
Methyltransf_32
Zn_ribbon_FGT1_2
Methyltransf_33
PCMT
Motif
Other DBs
NCBI-ProteinID:
AZQ10768
LinkDB
All DBs
Position
complement(1904634..1905584)
Genome browser
AA seq
316 aa
AA seq
DB search
MPAQQPDMQLQPLGELSSGFICPLCQQRLAADANSLVCAKGHRFDWAKEGYINLLPVQKK
RSKDPGDNKEMMQARRLFLESGFYQPLSDRVNELAASLPQSIHQLLDLGCGEGYYTARLA
DALTGGGAENAAKNVAKNAGKDVSSSAQSHSQQVQTYGLDISRAALKVAAKRYKSIHFCV
ASSFDTPFADGFFDLVLRIYAPSKPQELARIVAPGGYLLTVSAGPMHHFAVKQKIYDTPR
LHEDKDEWLEGFVPIHSERLQWQLELTEPEHILAFLEMTPYAWKFSPEAKITLAAKPFSC
ELDFRINLQQRVVQSE
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
ttgccagcacaacaaccagacatgcagcttcaaccattgggtgagcttagcagcggtttt
atttgtccactgtgtcagcagcgtctggccgccgatgccaactcacttgtatgcgctaaa
ggtcatcgtttcgattgggccaaagaaggctatatcaatttgctgccggtgcaaaaaaag
cgctcaaaagatcccggcgacaacaaagaaatgatgcaggcgagacgcctgtttctcgag
tccggtttttatcagccattaagtgacagagtgaacgaactggcggcatccttaccgcag
tctattcatcagcttttggaccttggctgtggtgaaggctattacaccgccaggctggca
gatgcattgactgggggcggcgcagaaaatgcggcaaagaatgtggcaaagaatgctggt
aaggatgtgagcagcagtgcccagagtcattcgcagcaggtgcaaacctatgggctggat
atttcacgtgcggccctcaaagtggcggcaaagcgttataagtcgattcacttttgcgtg
gccagcagctttgatacgccttttgctgatggctttttcgatttggtgctgcgcatttac
gcgccatccaagccacaggagcttgcccggatagtcgccccgggtggttatctgctgacg
gtatcggcaggacccatgcaccattttgcggtaaagcagaagatttacgacaccccaaga
ttgcacgaagataaagatgagtggctcgaagggtttgtgccgattcacagcgaacgattg
caatggcagcttgagctcactgagcctgagcatattctcgcctttctggagatgacgccc
tacgcctggaaattcagcccggaggcgaaaatcacgcttgctgccaagccattttcctgt
gaactggattttcggataaatttgcagcaacgagtcgtacaaagcgagtaa
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