KEGG   Shewanella khirikhana: STH12_01772
Entry
STH12_01772       CDS       T06711                                 
Name
(GenBank) hypothetical protein
  KO
K11900  type VI secretion system protein ImpC
Organism
skh  Shewanella khirikhana
Brite
KEGG Orthology (KO) [BR:skh00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:skh02044]
    STH12_01772
Secretion system [BR:skh02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   STH12_01772
SSDB
Motif
Pfam: VipB VipB_2 Interferon
Other DBs
NCBI-ProteinID: AZQ10880
UniProt: A0ABN5TVQ1
LinkDB
Position
complement(2027221..2028696)
AA seq 491 aa
MDVQSQSEALAPSANVNLLDQIMEQSKITPVDEGYDIARKGVAAFVANLLRTDNSEEPVN
KALVDKMLVELDRKISSQMDAILHNEKFQQMESAWRSLKLLIDRTDFRENIKIEMLHVTK
DELLDDFEFSPETAQSGLYKHVYSAGYGQFGGEPVAAIVGNYAFSPSSQDMKLLQYVGSV
GAMAHAPFLSSVSHEFFGVESFEELPNIKDLKAAFESPKYTKWRGLRESEDARYIGLTAP
RFLLRVPYDPVDNPVRSFNYREDVSASHEHYLWGNTAFALATRLTESFARYRWCPNIIGP
QSGGSVDDLPVHVFESMGALESKIPTEVLITDRKEFELADEGFISLTMRKGSDNAAFFSA
NSIQKPKVFPNTKEGKEAETNYKLGTQIPYMMIINRLAHYIKVLQREQIGAWKERQDLER
ELNNWIRQYVADQENPPADVRSRRPLRAARIEVKDVQGDPGWYQVSMAVRPHFKYMGANF
ELSLVGRLDQE
NT seq 1476 nt   +upstreamnt  +downstreamnt
atggatgttcaatctcaatcagaagcattggcaccgtctgccaatgtgaacctgctcgat
caaatcatggagcagtccaagatcacacctgtagacgaaggttatgacatagcccgtaag
ggcgttgccgcgtttgtcgcaaacctgctgcgtactgacaacagcgaagagcctgtcaat
aaagccttggttgacaagatgctcgtcgaacttgaccgtaaaatcagcagccaaatggat
gcgattttacacaacgaaaaattccagcagatggagtccgcctggcgcagtctgaagttg
ctgattgaccgcacagattttcgtgaaaatatcaaaattgaaatgctgcacgtcacaaaa
gacgagctgttggatgattttgagttttcgcctgaaacggctcagtccggtctttacaag
cacgtatactccgctggctatggccagtttggcggtgagccggttgcagcaatcgtaggt
aactatgccttttccccatcaagccaggatatgaagctgcttcagtatgttggttctgtg
ggagcaatggctcacgcgccgttcctgtcgtccgtttcccacgagttttttggtgtcgag
tcctttgaggaattacctaatatcaaggatttaaaggctgcatttgagagccctaagtac
accaagtggcgcgggctgcgtgagtcagaagatgcgcgttacattggtttgactgcgcct
cggttcctgctgcgagtgccttacgatccggtcgataatcccgtccgtagtttcaattac
cgtgaagatgtatcggccagtcacgagcattatctttggggtaacacagctttcgctctt
gctacccgtctcactgagagctttgcccgttaccgctggtgcccaaatattattgggccg
caaagtggtggttccgttgatgacttgccggtacatgtttttgaatcaatgggcgcgttg
gaaagcaaaatccctacagaagttctgatcacagatcgtaaagagttcgaacttgctgat
gaaggctttatctcactgacaatgcgtaagggaagcgacaatgcggcgtttttctctgca
aattcaattcagaagcccaaggtgttccctaacactaaagaaggtaaggaagcggagacc
aactacaagttgggtactcaaatcccttacatgatgatcatcaaccgccttgctcactac
atcaaagtgctgcagcgcgaacagattggtgcatggaaagaacgtcaggatttggaacgt
gaactgaacaactggattaggcagtacgtagccgatcaggagaaccctccggcagatgtt
cgtagccgccgtccacttcgtgctgcacgtattgaagtgaaggatgtgcagggcgatccg
ggttggtatcaggtttccatggcagttcgtccccactttaagtacatgggagccaatttt
gagctctccctggtaggtcgtttggatcaggagtaa

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