Shewanella khirikhana: STH12_01779
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Entry
STH12_01779 CDS
T06711
Symbol
clpA
Name
(GenBank) ATP-dependent Clp protease ATP-binding subunit ClpA
KO
K03694
ATP-dependent Clp protease ATP-binding subunit ClpA
Organism
skh
Shewanella khirikhana
Brite
KEGG Orthology (KO) [BR:
skh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
skh03110
]
STH12_01779 (clpA)
Chaperones and folding catalysts [BR:
skh03110
]
Heat shock proteins
HSP100
STH12_01779 (clpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
ClpB_D2-small
AAA_5
Clp_N
Sigma54_activat
AAA_22
AAA_16
AAA_7
TniB
AAA_14
AAA_3
RuvB_N
nSTAND3
AAA_6
AAA_18
IstB_IS21
bpMoxR
TsaE
TIP49
AAA_28
NACHT
Rad17
Motif
Other DBs
NCBI-ProteinID:
AZQ10887
LinkDB
All DBs
Position
complement(2032664..2034925)
Genome browser
AA seq
753 aa
AA seq
DB search
MLNKDLEVTLNLAFQQARDARHEYMTVEHLLLALIDNPSAQDALVACGADIDRLREDVAT
FISQTTPVITDPNDDRETQPTLGFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQA
VYLLRRSDITRLDVVNYISHGFSKSEDAPQETEQERIEDQSEQAEEQRSMLSQFASNLNL
MAAQGIIDPLIGRDNEIERSIQILCRRRKNNPLLVGEAGVGKTAIAEGLAYRIVNDEVPD
VMRDATVYSLDLGALLAGTKYRGDFEKRFKSLLKELTADKHAILFIDEIHTIIGAGAASG
GVMDASNLLKPLLSSGTLRCMGSTTFQEYQSIFEKDRALARRFQKVDINEPSVAETTKIL
MGLKSKYEEYHGVRYTQAALASAAELSAKHINDRHLPDKAIDVIDEAGARMAMLPASKRR
KTIGQPDIEAIIAKIARIPEKSVSTSDKEMLKNLERNLKMVVFGQDKAIEGLSAAIRLSR
SGLGAENKPVGSFLFAGPTGVGKTEVTNQLAKCLGLKLIRFDMSEYMEAHTVSRLIGAPP
GYVGYDQGGLLTDAVIKHPHSVVLLDEIEKAHPDVYNLLLQVMDHGTLTDNNGRKADFRH
VTLVMTTNAGVQETVRKSIGFKQQDHSHDAMSEINRVFSPEFRNRLDSIIWFNHLDLTII
AKVVDKFLTELQAQLDAKRVTLVVSDEARTLLAEKGYDKAMGARPMARVVKDLIKRPLAD
EILFGELEQGGFAHVDAQDGEIVISAEKLEKVT
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgctgaacaaagatcttgaagtgacgttgaatctggcgtttcagcaggcaagggatgcc
cgccacgaatatatgaccgtggagcatttgctgctcgcgctcattgataacccgtcggct
caggatgccctggtcgcctgtggtgcagatattgacagactcagggaagatgtcgcgact
tttatttcccaaaccacgccggtgatcaccgaccccaatgacgaccgtgaaactcagcca
acgcttgggtttcagcgggtgttgcaacgggcggtgttccatgtgcagtcctccggtcgt
aacgaagtgaccggcgccaatgtgttggtggccattttcagtgagcaggaatctcaggcc
gtgtacttgctgcgtcgaagcgatattacccgcctcgatgtggtgaactatatttcccac
ggattttccaagagtgaagatgcgcctcaggaaactgagcaggagcgcattgaagatcaa
tccgagcaggccgaagagcagcgcagcatgctgtcgcagtttgcctctaacctcaatttg
atggccgcccaggggattattgacccacttatcggccgcgataatgagattgaacgctca
atccaaatcctctgccgtcgccgtaaaaacaacccactgctggtgggtgaggccggtgtg
ggcaaaaccgccattgctgaaggtctggcataccggattgtgaatgacgaagtgcctgac
gtaatgcgcgatgccactgtgtattcactggatttgggcgcgctgctggcgggcaccaag
taccgcggcgatttcgagaagcgctttaagagcctgctaaaggaacttaccgctgacaag
cacgctattctctttatcgacgaaattcataccatcataggtgccggcgccgcctccggt
ggagtgatggatgcttccaacctgcttaaaccgctgctttcaagcggaacgctacgttgt
atgggctctaccaccttccaggaataccagagcatttttgagaaggacagggcacttgcc
cgccgtttccagaaggtggatatcaacgagccatcggtggccgaaaccaccaagattttg
atgggccttaagagcaagtacgaagagtatcacggggtgcgatacacccaggctgcgctc
gccagtgctgcagagcttagcgccaagcacattaatgaccgacatctgcccgacaaggcc
attgatgttattgatgaggccggtgcccgcatggcgatgttgcctgccagtaagcgccgc
aaaaccataggtcagcccgatatcgaggccatcattgccaagattgcccgtattcctgag
aagtcggtgtctacctcagacaaagaaatgctcaagaaccttgagcgcaaccttaaaatg
gtggtattcggtcaggacaaggccattgaaggcctgagcgctgctattcgcctctctcgc
agtggccttggcgcagagaacaagcccgtgggcagcttcctgtttgccggaccaaccggt
gtgggtaaaaccgaggtgaccaaccaacttgccaagtgcctggggctgaaactcatccgt
ttcgatatgtccgagtacatggaggcgcatactgtgtcgcgcttgattggtgcgccgcca
ggctatgttggttacgatcagggtggtttgctcaccgacgcggttatcaagcatccccac
agtgtggtgctgctcgatgaaatcgaaaaggcacacccggacgtgtacaacctgctgctg
caggtaatggaccacggtaccttgaccgataacaatggtcgtaaggcagatttccgccac
gtcaccctggtgatgactaccaacgcaggggtacaggaaacggtacgtaaatccattggc
tttaagcagcaggatcacagtcacgatgccatgtcggaaattaatcgggtgttctcacct
gaattccgtaaccggctcgattccatcatctggttcaaccatctggatctgaccatcatt
gccaaggtggtggacaagttcctcaccgagttgcaggcccagcttgatgccaagcgggta
accttggtggtgagtgatgaagccagaaccttgctggccgagaagggctatgacaaggcc
atgggcgcacggccaatggcgcgagtggtcaaagatctgattaaacggccgctggccgat
gaaatcctctttggcgaactggagcagggcggctttgcccatgtggatgcgcaggatggc
gagatagtgataagtgcagagaagctggaaaaggtgacctga
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