Shewanella khirikhana: STH12_01783
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Entry
STH12_01783 CDS
T06711
Symbol
rluE
Name
(GenBank) Ribosomal large subunit pseudouridine synthase E
KO
K06181
23S rRNA pseudouridine2457 synthase [EC:
5.4.99.20
]
Organism
skh
Shewanella khirikhana
Brite
KEGG Orthology (KO) [BR:
skh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
skh03009
]
STH12_01783 (rluE)
Enzymes [BR:
skh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.20 23S rRNA pseudouridine2457 synthase
STH12_01783 (rluE)
Ribosome biogenesis [BR:
skh03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
STH12_01783 (rluE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
DUF5818
Motif
Other DBs
NCBI-ProteinID:
AZQ10891
LinkDB
All DBs
Position
2038444..2039244
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AA seq
266 aa
AA seq
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MSSPSRANKPSAKRPSSSSSKRQAQGQKKGFATTSQQATAKHRKSSNGKGPGTGKRLSEK
TAKRANAKAVTQVVLFNKPFDVLCQFTDEAGRQTLKDFIPLPGVYAAGRLDRDSEGLLLL
TNDGQLQSRLTEPKKQTYKTYWVQVEGIPDESALDKLREGVELKDGPTLPARVRRIDAPP
IWPRNPPVRERKSIPDCWLEIQICEGRNRQVRRMTAHIGYPTLRLVRAAIGEISLGQLGS
GEYRELSRDEISRLGAGLGLKREFYP
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgtccccttctcgcgccaataaaccctcggccaagcgcccttccagcagctcatcg
aagcggcaagcacagggtcagaaaaaaggttttgcaaccaccagccagcaggcaaccgcc
aaacaccgcaaatcatccaatggcaaagggcccggcactggcaaacggctgtcagagaaa
accgcaaaaagggcaaacgccaaggctgtcacccaggtcgtgctgttcaacaagcccttc
gatgtgttgtgccagttcaccgacgaagccggcaggcaaaccctcaaggactttattccc
ttgcccggcgtctacgccgcaggcaggctcgacagagacagcgaaggcctgttgctgctc
accaacgatggccagctgcaatcccggcttaccgagccgaaaaagcaaacctataaaacc
tattgggtgcaggtcgaaggcattcccgatgagtcggcgctggataaactgcgcgagggt
gttgaactaaaagacggccctactctgccagccagagtgcgccgtatcgatgcgcctcca
atatggccgcgcaatccgccggtgcgggagcgaaagagcattcccgactgctggctcgaa
attcagatttgtgaaggtcgcaaccgccaggttcggcgcatgacggcccacattggctat
cccacattaaggctggtgcgcgccgccatcggtgagataagccttggacaacttggcagc
ggcgagtaccgggagcttagccgggatgaaataagccgtctcggcgccggtcttggtctc
aaacgcgaattttacccgtaa
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